RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 LATS1O95835 1130 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 RHOP08100 348 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 LTA4HP09960 611 aaKnown RBP12.19□□□□□ -0.46
LIN54-206ENST00000506560 GM2AP17900 193 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 TFEBP19484 476 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 FDXRP22570 491 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 PMLP29590 882 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 CDC25CP30307 473 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 LRRC73Q5JTD7 316 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 TTC8Q8TAM2 541 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
LIN54-206ENST00000506560 NSL1Q96IY1 281 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 RETREG1Q9H6L5 497 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 TAS2R1Q9NYW7 299 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 A0A087X1B8 175 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 A8MT66 165 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 IQCF5A8MTL0 148 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 ATP6V1G2O95670 118 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 CRTAMO95727 393 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 COL6A2P12110 1019 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 MC4RP32245 332 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 SLC14A2Q15849 920 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 INO80DQ53TQ3 878 aaPredicted RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 TRIM67Q6ZTA4 783 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 ISCA2Q86U28 154 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 PIH1D2Q8WWB5 315 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 NUF2Q9BZD4 464 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 DRC3Q9H069 523 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 SAR1AQ9NR31 198 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 CDH22Q9UJ99 828 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 NEDD8-MDP1E9PL57 170 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 LPOP22079 712 aaPredicted RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 PTPN4P29074 926 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 EPHA3P29320 983 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 ERFP50548 548 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 EPHB1P54762 984 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 FUT11Q495W5 492 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 MRNIPQ6NTE8 343 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 GRASPQ7Z6J2 395 aaPredicted RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 ELMOD1Q8N336 334 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 C12orf76Q8N812 135 aaPredicted RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 FAM13CQ8NE31 585 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 LPGAT1Q92604 370 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 MRPL57Q9BQC6 102 aaKnown RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 EMILIN2Q9BXX0 1053 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 SLCO3A1Q9UIG8 710 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 IRAK3Q9Y616 596 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 HELZP42694 1942 aaKnown RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 PPP6CO00743 305 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 GRID2O43424 1007 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 NIPSNAP2O75323 286 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 ESRRAP11474 423 aaPredicted RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 CREMQ03060 361 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 OR4D1Q15615 310 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 PDCD2Q16342 344 aaPredicted RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 TYSND1Q2T9J0 566 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 ZRANB3Q5FWF4 1079 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 TMEM198Q66K66 360 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 PAQR3Q6TCH7 311 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 ZNF783Q6ZMS7 281 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 GPR65Q8IYL9 337 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 NAT16Q8N8M0 369 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 GPR150Q8NGU9 434 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 SORCS1Q8WY21 1168 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 LMLNQ96KR4 655 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 MARK4Q96L34 752 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 LRRC3BQ96PB8 259 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 AARSD1Q9BTE6 412 aaKnown RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 YY1AP1Q9H869 796 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 L3MBTL1Q9Y468 752 aa12.18□□□□□ -0.46
LIN54-206ENST00000506560 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
LIN54-206ENST00000506560 C2orf81A6NN90 581 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 TRAFD1O14545 582 aaPredicted RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 STX7O15400 261 aaKnown RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 SERPINA6P08185 405 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 HSPA1AP0DMV8 641 aaKnown RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 HSPA1BP0DMV9 641 aaKnown RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 ALOX15P16050 662 aaPredicted RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 ZNF37AP17032 561 aaPredicted RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 NCF2P19878 526 aaPredicted RBP12.17□□□□□ -0.46
LIN54-206ENST00000506560 POLD2P49005 469 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 PFKPQ01813 784 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 NSUN2Q08J23 767 aaKnown RBP eCLIP12.17□□□□□ -0.46
LIN54-206ENST00000506560 PTPRNQ16849 979 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 FAM83EQ2M2I3 478 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 MPPE1Q53F39 396 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 SPDYAQ5MJ70 313 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 C9orf50Q5SZB4 431 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 EPGNQ6UW88 154 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 ADGRD2Q7Z7M1 963 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 TSPAN33Q86UF1 283 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 CPXM2Q8N436 756 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 FIBINQ8TAL6 211 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 MYO19Q96H55 970 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 CLPTM1LQ96KA5 538 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 BIRC8Q96P09 236 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 GCNAQ96QF7 691 aa12.17□□□□□ -0.46
LIN54-206ENST00000506560 C2orf49Q9BVC5 232 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms