RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 CHRNA4P43681 627 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 GDF10P55107 478 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 HNRNPKP61978 463 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMN1-204ENST00000506163 DPTQ07507 201 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 OLIG2Q13516 323 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 ENPP7Q6UWV6 458 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 LYSMD3Q7Z3D4 306 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 SLC13A5Q86YT5 568 aaPredicted RBP17.81■□□□□ 0.44
SMN1-204ENST00000506163 CLPBQ9H078 707 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 GBA3Q9H227 469 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 RSPH14Q9UHP6 348 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 SHOC2Q9UQ13 582 aa17.81■□□□□ 0.44
SMN1-204ENST00000506163 SIGLEC6O43699 453 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 NRDCO43847 1150 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 LRP4O75096 1905 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 HOXC4P09017 264 aaPredicted RBP17.8■□□□□ 0.44
SMN1-204ENST00000506163 FTH1P19P0C7X4 201 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 KIAA1024LP59773 190 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 DNAJC3Q13217 504 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 C1orf61Q13536 156 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 SIX1Q15475 284 aaPredicted RBP17.8■□□□□ 0.44
SMN1-204ENST00000506163 PHACTR4Q8IZ21 702 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 FAM71DQ8N9W8 422 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 TTC13Q8NBP0 860 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 PTCD2Q8WV60 388 aaKnown RBP17.8■□□□□ 0.44
SMN1-204ENST00000506163 OR1E3Q8WZA6 343 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 CNDP2Q96KP4 475 aaKnown RBP17.8■□□□□ 0.44
SMN1-204ENST00000506163 ALS2CR12Q96Q35 445 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 CDC6Q99741 560 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 LRRC61Q9BV99 259 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 TEX101Q9BY14 249 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 MAGEE1Q9HCI5 957 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 FGF22Q9HCT0 170 aa17.8■□□□□ 0.44
SMN1-204ENST00000506163 MRPL40Q9NQ50 206 aaKnown RBP17.8■□□□□ 0.44
SMN1-204ENST00000506163 COL5A1P20908 1838 aaPredicted RBP17.79■□□□□ 0.44
SMN1-204ENST00000506163 LY6G6EA0A0G2JKS1 128 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 GOLGA6L9A6NEM1 432 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 TNFSF14O43557 240 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 DKK1O94907 266 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 AGTP01019 485 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 EPOP01588 193 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 MYF5P13349 255 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 PSMB4P28070 264 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 SPINT3P49223 89 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 HK3P52790 923 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 SRP54P61011 504 aaKnown RBP17.79■□□□□ 0.44
SMN1-204ENST00000506163 PPARDQ03181 441 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 PROX2Q3B8N5 592 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 SIRPB2Q5JXA9 342 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 FAXCQ5TGI0 409 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 RD3Q7Z3Z2 195 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 TMC3Q7Z5M5 1100 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 HEATR4Q86WZ0 1026 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 HID1Q8IV36 788 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 IPMKQ8NFU5 416 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 TRIM58Q8NG06 486 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 UBE2Q2Q8WVN8 375 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 AP2M1Q96CW1 435 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 PDXPQ96GD0 296 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 WDR92Q96MX6 357 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 SPATA13Q96N96 652 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 TMEM121Q9BTD3 319 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 RIOK2Q9BVS4 552 aaKnown RBP17.79■□□□□ 0.44
SMN1-204ENST00000506163 CARD9Q9H257 536 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 WDR26Q9H7D7 661 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 FTSJ1Q9UET6 329 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 U3KQA8 63 aa17.79■□□□□ 0.44
SMN1-204ENST00000506163 C5orf60A6NFR6 353 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 LDOC1O95751 146 aaPredicted RBP17.78■□□□□ 0.44
SMN1-204ENST00000506163 TSHRP16473 764 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 SPINK2P20155 84 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 TEAD1P28347 426 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 ADRA1AP35348 466 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 CDK3Q00526 305 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 FOXK2Q01167 660 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 MPP3Q13368 585 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 TCEA2Q15560 299 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 SLC1A5Q15758 541 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 PRRT3Q5FWE3 981 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 SEL1L2Q5TEA6 688 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 RAET1GQ6H3X3 334 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 NLRP8Q86W28 1048 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 NRSN1Q8IZ57 195 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 SLC25A41Q8N5S1 370 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 OR4C6Q8NH72 309 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 LMX1AQ8TE12 382 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 C1orf54Q8WWF1 131 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 ZFYVE1Q9HBF4 777 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 KCTD5Q9NXV2 234 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 APOBEC3BQ9UH17 382 aaKnown RBP17.78■□□□□ 0.44
SMN1-204ENST00000506163 CNOT6Q9ULM6 557 aaKnown RBP17.78■□□□□ 0.44
SMN1-204ENST00000506163 ZNF711Q9Y462 761 aa17.78■□□□□ 0.44
SMN1-204ENST00000506163 GOLGA6CA6NDK9 693 aa17.77■□□□□ 0.44
SMN1-204ENST00000506163 GOLGA6BA6NDN3 693 aa17.77■□□□□ 0.44
SMN1-204ENST00000506163 CACNB4O00305 520 aaPredicted RBP17.77■□□□□ 0.44
SMN1-204ENST00000506163 ENC1O14682 589 aa17.77■□□□□ 0.44
SMN1-204ENST00000506163 AQP9O43315 295 aa17.77■□□□□ 0.44
SMN1-204ENST00000506163 LIASO43766 372 aa17.77■□□□□ 0.44
SMN1-204ENST00000506163 METTL18O95568 372 aa17.77■□□□□ 0.44
SMN1-204ENST00000506163 PTMAP06454 111 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms