RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ABCD1P33897 745 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 RORAP35398 523 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TRIM23P36406 574 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 CXCR3P49682 368 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TKTL1P51854 596 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 CCNHP51946 323 aaPredicted RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TBX4P57082 545 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 DMPKQ09013 629 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 MYBPHQ13203 477 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ORC2Q13416 577 aaPredicted RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 MTM1Q13496 603 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 EIF4EBP2Q13542 120 aaPredicted RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 CAPRIN1Q14444 709 aaKnown RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 KRT32Q14532 448 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 LRRC14Q15048 493 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 PRKD1Q15139 912 aaPredicted RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TLR1Q15399 786 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 SYCP1Q15431 976 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF805Q5CZA5 627 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 Q5PR19 223 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 PLEKHS1Q5SXH7 462 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 L1TD1Q5T7N2 865 aaKnown RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ERICH6BQ5W0A0 696 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 KRT79Q5XKE5 535 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 RAP1GAP2Q684P5 730 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 SLC30A9Q6PML9 568 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 GPBP1Q86WP2 473 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 PPP1R3BQ86XI6 285 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 UNC45BQ8IWX7 931 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 GPD1LQ8N335 351 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 SFRP1Q8N474 314 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 KIAA0895Q8NCT3 520 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 OR10G6Q8NH81 332 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 DNAJB14Q8TBM8 379 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 CA5BP1Q8WTZ4 195 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 KLHL6Q8WZ60 621 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TM9SF4Q92544 642 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF274Q96GC6 653 aaPredicted RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 JAKMIP1Q96N16 626 aaKnown RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 FCRL4Q96PJ5 515 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 HEPHQ9BQS7 1158 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 NDC1Q9BTX1 674 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 WRAP53Q9BUR4 548 aaKnown RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 NLNQ9BYT8 704 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 UBXN6Q9BZV1 441 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TKTL2Q9H0I9 626 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ZHX3Q9H4I2 956 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 NEUROD4Q9HD90 331 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TRNAU1APQ9NX07 287 aaKnown RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 SEMA5BQ9P283 1151 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ABI3Q9P2A4 366 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 APEX2Q9UBZ4 518 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 SEC14L3Q9UDX4 400 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 SNX7Q9UNH6 387 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TBC1D30Q9Y2I9 924 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ACTL7AQ9Y615 435 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 SNRNP200O75643 2136 aaKnown RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ROS1P08922 2347 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 CADP27708 2225 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ARHGAP21Q5T5U3 1957 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TYW5A2RUC4 315 aaKnown RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TULP1O00294 542 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 O00370 1275 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 CPLX1O14810 134 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TOX3O15405 576 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ZNHIT1O43257 154 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 HTRA2O43464 458 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 STX6O43752 255 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 KLK8O60259 260 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 BUB1BO60566 1050 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 PRAMEF2O60811 474 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ZMPSTE24O75844 475 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ENDOD1O94919 500 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 IGLV3-25P01717 112 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 PCCBP05166 539 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ESRRAP11474 423 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 BRAFP15056 766 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 FOLR1P15328 257 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 NELFEP18615 380 aaKnown RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 CD58P19256 250 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 HOXD13P35453 343 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SCNN1AP37088 669 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ARCN1P48444 511 aaKnown RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SEPHS1P49903 392 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TOB1P50616 345 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 CLCN6P51797 869 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 EPHB1P54762 984 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 EPHA4P54764 986 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 FOXL2P58012 376 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 DAOAP59103 153 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 DCAF7P61962 342 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 CTBSQ01459 385 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 NRG1Q02297 640 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ADIGQ0VDE8 80 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 STK3Q13188 491 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 PSMD6Q15008 389 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 INAQ16352 499 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ZACNQ401N2 412 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TMEM52BQ4KMG9 183 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 UBAP2Q5T6F2 1119 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms