RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 FOXJ1Q92949 421 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 ISL2Q96A47 359 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 SPACA7Q96KW9 195 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 FCRL3Q96P31 734 aaPredicted RBP8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 ITM2BQ9Y287 266 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 PCDHGB2Q9Y5G2 931 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 FAM169AQ9Y6X4 670 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 PIKFYVEQ9Y2I7 2098 aa8.27□□□□□ -1.09
CDC42SE2-208ENST00000505065 TNFRSF10CO14798 259 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 DNAJC6O75061 913 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 URI1O94763 535 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 IL1BP01584 269 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 ALPIP09923 528 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 LIMK1P53667 647 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 ITGA8P53708 1063 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 GALNT3Q14435 633 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 TRADDQ15628 312 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 BCL7AQ4VC05 210 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 SEL1L3Q68CR1 1132 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 PNCKQ6P2M8 343 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 TSSK4Q6SA08 328 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 LYSMD3Q7Z3D4 306 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 MREGQ8N565 214 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 MFSD2AQ8NA29 543 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 NCKAP1Q9Y2A7 1128 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 LAMA1P25391 3075 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CTAGE15A4D2H0 777 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 LRRC72A6NJI9 287 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 PRAMEF26H0Y7S4 382 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CTAGE8P0CG41 777 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 RPS3P23396 243 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 TIAL1Q01085 375 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 FAM182AQ5T1J6 154 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 IZUMO3Q5VZ72 239 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 ERAP2Q6P179 960 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CTAGE6Q86UF2 777 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 SPATS2Q86XZ4 545 aaKnown RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CTAGE4Q8IX94 777 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 MPP5Q8N3R9 675 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 OR52K1Q8NGK4 314 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 SLC17A9Q9BYT1 436 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 IL26Q9NPH9 171 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 FAM114A2Q9NRY5 505 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 VPS18Q9P253 973 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CTSKP43235 329 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 DNA2P51530 1060 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 B4GALNT1Q00973 533 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 ILF2Q12905 390 aaKnown RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 RASA2Q15283 850 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 IRF4Q15306 451 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 FAM160A2Q8N612 972 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 AENQ8WTP8 325 aaKnown RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 EBNA1BP2Q99848 306 aaKnown RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 NAT9Q9BTE0 207 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 HEATR9A2RTY3 570 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 DLL1O00548 723 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 IVLP07476 585 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 ABHD2P08910 425 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 GSTM1P09488 218 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 HNRNPA2B1P22626 353 aaKnown RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 NXPH1P58417 271 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 GSTM4Q03013 218 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 ACCSLQ4AC99 568 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 SETMARQ53H47 684 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CCDC181Q5TID7 509 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 ANO7Q6IWH7 933 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 C11orf96Q7Z7L8 435 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 LMNTD2Q8IXW0 634 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CAVIN3Q969G5 261 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CARD6Q9BX69 1037 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 MBNL1Q9NR56 388 aaKnown RBP8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 SYBUQ9NX95 663 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 CYP8B1Q9UNU6 501 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 TTLL3Q9Y4R7 772 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 RALGAPA1Q6GYQ0 2036 aa8.26□□□□□ -1.09
CDC42SE2-208ENST00000505065 RHOBTB1O94844 696 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 CLDN7O95471 211 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 GIMD1P0DJR0 217 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 RACK1P63244 317 aaKnown RBP8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 NR1D2Q14995 579 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 PPP1R21Q6ZMI0 780 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 RABEPKQ7Z6M1 372 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZSCAN5AQ9BUG6 496 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZFYVE1Q9HBF4 777 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 DNAAF2Q9NVR5 837 aaKnown RBP8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 SEPT10Q9P0V9 454 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 NUMA1Q14980 2115 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 F5P12259 2224 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 A0A1W2PQU0 124 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 A6NCN8 305 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 NFKBIAP25963 317 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 MAGEA12P43365 314 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 GPX6P59796 221 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 SDR16C5Q8N3Y7 309 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 KLHL42Q9P2K6 505 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 IGLON5A6NGN9 336 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 TCEA3O75764 348 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 PGAM1P18669 254 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 LPOP22079 712 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms