RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 IGKV2-30P06310 120 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 ACADMP11310 421 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 CDAP32320 146 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 SHMT1P34896 483 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 GABRB2P47870 512 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 F2RL1P55085 397 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 GPS2Q13227 327 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 EIF4A2Q14240 407 aaKnown RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 CTTNQ14247 550 aaKnown RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 DRAP1Q14919 205 aaPredicted RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 MMEL1Q495T6 779 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 ZNF549Q6P9A3 640 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 DEFB132Q7Z7B7 95 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 ADSSL1Q8N142 457 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 Q8N9P0 234 aaPredicted RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 HUS1BQ8NHY5 278 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 TMEM163Q8TC26 289 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 OIT3Q8WWZ8 545 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 TRIB2Q92519 343 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 ZKSCAN4Q969J2 545 aaPredicted RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 FAM149B1Q96BN6 582 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 MMABQ96EY8 250 aaPredicted RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 VCPIP1Q96JH7 1222 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 ITPAQ9BY32 194 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 TMX4Q9H1E5 349 aaPredicted RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 MRPL44Q9H9J2 332 aaKnown RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 SLC28A3Q9HAS3 691 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 CLK4Q9HAZ1 481 aaKnown RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 GPR108Q9NPR9 543 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 SEPT11Q9NVA2 429 aaKnown RBP3.3□□□□□ -1.88
RFC1-209ENST00000504974 HIF1ANQ9NWT6 349 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 OR6C3Q9NZP0 311 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 MYO6Q9UM54 1294 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 GCC2Q8IWJ2 1684 aa3.3□□□□□ -1.88
RFC1-209ENST00000504974 UNC13BO14795 1591 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 UGGT1Q9NYU2 1555 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 LMTK2Q8IWU2 1503 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 NLRP1Q9C000 1473 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 RGS12O14924 1447 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 RRBP1Q9P2E9 1410 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 ROCK1Q13464 1354 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 XIRP1Q702N8 1843 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 CD8B2A6NJW9 211 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 HMGB1P1B2RPK0 211 aaPredicted RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 INAFM1C9JVW0 142 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 F5H0A9 414 aaPredicted RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 SPRY3O43610 288 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 PAGE4O60829 102 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 NDUFB4O95168 129 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 IPO7O95373 1038 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 DDX58O95786 925 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 MLYCDO95822 493 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 SCGB1D1O95968 90 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 EIF2S1P05198 315 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 G6PDP11413 515 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 RARGP13631 454 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 AGAP20933 346 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 GNLYP22749 145 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 PSMA4P25789 261 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 C21orf33P30042 268 aaPredicted RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 MAPK4P31152 587 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 HOXA11P31270 313 aaPredicted RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 RPL3P39023 403 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 MLH1P40692 756 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 CASP2P42575 452 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 RFX2P48378 723 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 PCYT1AP49585 367 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 NUDT6P53370 316 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 NAP1L1P55209 391 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 ROR2Q01974 943 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 NAE1Q13564 534 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 NEDD9Q14511 834 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 LEXMQ3ZCV2 418 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 TMED8Q6PL24 325 aaPredicted RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 QSOX2Q6ZRP7 698 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 SHFQ7M4L6 423 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 TECPR1Q7Z6L1 1165 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 FJX1Q86VR8 437 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 SCCPDHQ8NBX0 429 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 BEST2Q8NFU1 509 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 OR14A16Q8NHC5 309 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 USP6NLQ92738 828 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 DCLK3Q9C098 648 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 NDST4Q9H3R1 872 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 PLEKHA4Q9H4M7 779 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 SH2D4AQ9H788 454 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 KAT14Q9H8E8 782 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 DDX4Q9NQI0 724 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 ASAH2Q9NR71 780 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 TBC1D22BQ9NU19 505 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 HAUS2Q9NVX0 235 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 DLGAP2Q9P1A6 1054 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 CNOT8Q9UFF9 292 aaKnown RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 FBXO9Q9UK97 447 aaPredicted RBP3.29□□□□□ -1.88
RFC1-209ENST00000504974 RCOR1Q9UKL0 485 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 ERVK-11Q9UQG0 969 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 RAI2Q9Y5P3 530 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 LRP6O75581 1613 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 SYNMO15061 1565 aa3.29□□□□□ -1.88
RFC1-209ENST00000504974 EFCAB6Q5THR3 1501 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms