RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MAGEA11P43364 429 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 RFX3P48380 749 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 SULT2A1Q06520 285 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 GRAMD4Q6IC98 578 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 NPWQ8N729 165 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 ZMIZ2Q8NF64 920 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 HEXDCQ8WVB3 486 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 GFM2Q969S9 779 aaKnown RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 SAR1AQ9NR31 198 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 ARIH1Q9Y4X5 557 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 NFS1Q9Y697 457 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 C2orf78A6NCI8 922 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 GABRDO14764 452 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 ENTPD5O75356 428 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 IGFBP6P24592 240 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 GPC1P35052 558 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 PLOD1Q02809 727 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 WASHC5Q12768 1159 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 AASDHQ4L235 1098 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 PPP2R2DQ66LE6 453 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 OR8D1Q8WZ84 308 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 BADQ92934 168 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 PITPNM1O00562 1244 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 SCAMP1O15126 338 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 TEX28O15482 410 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 LBPP18428 481 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 ECHS1P30084 290 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 GKP32189 559 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 PGGT1BP53609 377 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 SIRPB2Q5JXA9 342 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 CLEC6AQ6EIG7 209 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 RRM2BQ7LG56 351 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 ADAMTSL2Q86TH1 951 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 CPNE9Q8IYJ1 553 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 CYB5D2Q8WUJ1 264 aa14.08□□□□□ -0.15
TCOF1-207ENST00000504761 TNPO3Q9Y5L0 923 aaKnown RBP14.08□□□□□ -0.15
TCOF1-207ENST00000504761 COL4A5P29400 1685 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 SRRM3A6NNA2 597 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-207ENST00000504761 MAP3K13O43283 966 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 VHLP40337 213 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 CUZD1Q86UP6 607 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 PTCD2Q8WV60 388 aaKnown RBP14.08□□□□□ -0.16
TCOF1-207ENST00000504761 ARL8BQ9NVJ2 186 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 NMRK1Q9NWW6 199 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 BRWD3Q6RI45 1802 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 TTC36A6NLP5 189 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 TMEM114B3SHH9 223 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 SHOX2O60902 331 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-207ENST00000504761 IPO13O94829 963 aaKnown RBP14.08□□□□□ -0.16
TCOF1-207ENST00000504761 OAZ2O95190 189 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 DGKGP49619 791 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 THOP1P52888 689 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 TEAD2Q15562 447 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 C2orf73Q8N5S3 287 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-207ENST00000504761 C12orf76Q8N812 135 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-207ENST00000504761 ADNPQ9H2P0 1102 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 FAM32AQ9Y421 112 aaKnown RBP14.08□□□□□ -0.16
TCOF1-207ENST00000504761 TRAF6Q9Y4K3 522 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 ASB3Q9Y575 518 aa14.08□□□□□ -0.16
TCOF1-207ENST00000504761 C9JVG2 144 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ZSCAN9O15535 394 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 DPY19L2P1Q6NXN4 242 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 NAT14Q8WUY8 206 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 PYDC1Q8WXC3 89 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 MAGED4Q96JG8 741 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBCDQ9BTW9 1192 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 PHACTR1Q9C0D0 580 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 POLR3BQ9NW08 1133 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ILVBLA1L0T0 632 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 AZIN1O14977 448 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ULK1O75385 1050 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 RFPL2O75678 378 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 IVDP26440 423 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ATP6V0D1P61421 351 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 AP1S1P61966 158 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ACSM2AQ08AH3 577 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TRMT5Q32P41 509 aaKnown RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ACSM2BQ68CK6 577 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 SERPINA9Q86WD7 417 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 YIPF3Q9GZM5 350 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3DA0A087WVF3 549 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3IA0A087WXS9 549 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3EA0A087X179 549 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3KA0A087X1G2 549 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3FA6NER0 549 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 CCDC154A6NI56 674 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3LB9A6J9 549 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 FAM189A1O60320 539 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 NFATC1O95644 943 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 POP4O95707 220 aaKnown RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3HP0C7X1 549 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 GRK3P35626 688 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 ELF3P78545 371 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 CAP1Q01518 475 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TSNQ15631 228 aaKnown RBP14.07□□□□□ -0.16
TCOF1-207ENST00000504761 CCDC157Q569K6 752 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3GQ6DHY5 549 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D3CQ6IPX1 549 aa14.07□□□□□ -0.16
TCOF1-207ENST00000504761 GPRIN3Q6ZVF9 776 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms