RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ADCY8P40145 1251 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 FASLGP48023 281 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 POLR2LP62875 67 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 C6orf15Q6UXA7 325 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 DPPA4Q7L190 304 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 PHLDB2Q86SQ0 1253 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 RTL3Q8N8U3 475 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 MSANTD4Q8NCY6 345 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 NCSTNQ92542 709 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 NUS1Q96E22 293 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 TEX101Q9BY14 249 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 MAGEB5Q9BZ81 275 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 SLC29A3Q9BZD2 475 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 ULBP3Q9BZM4 244 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 TWSG1Q9GZX9 223 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 DONSONQ9NYP3 566 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 ST14Q9Y5Y6 855 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 FBN2P35556 2912 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 FAM170AA1A519 330 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 WIPF3A6NGB9 483 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 A8MX80 341 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 TCP11X1B4DZS4 312 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 RASA4BC9J798 803 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 RASA4O43374 803 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 PGDP52209 483 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 BPIFB4P59827 614 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 APBA1Q02410 837 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 MRPL49Q13405 166 aaKnown RBP15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 PARP15Q460N3 678 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 NADK2Q4G0N4 442 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 RAB6CQ53S08 254 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 C2CD6Q53TS8 623 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 C1QL3Q5VWW1 255 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 GBP6Q6ZN66 633 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 TMEM135Q86UB9 458 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 FMR1NBQ8N0W7 255 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 EMC1Q8N766 993 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 SNX21Q969T3 373 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 MOCOSQ96EN8 888 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 RAB6CQ9H0N0 254 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 KCTD5Q9NXV2 234 aa15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 HOOK1Q9UJC3 728 aaKnown RBP15.77■□□□□ 0.12
PDLIM7-210ENST00000503827 TRBV23OR9-2A0A075B6M9 112 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 PIPSLA2A3N6 862 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 FOXN3O00409 490 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 CREG1O75629 220 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 DNAJB5O75953 348 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 SORBS2O94875 1100 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 RECKO95980 971 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 IVLP07476 585 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 EPHB2P29323 1055 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 CDK3Q00526 305 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 BCL2L1Q07817 233 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 SEMA5AQ13591 1074 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 INPP5JQ15735 1006 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 C15orf59Q2T9L4 293 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 LYSMD3Q7Z3D4 306 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 SRLQ86TD4 932 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 SLC37A2Q8TED4 501 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 PTCD2Q8WV60 388 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 ECHDC3Q96DC8 303 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 STAMBPL1Q96FJ0 436 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 COQ10AQ96MF6 247 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 ZNF768Q9H5H4 540 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 METTL5Q9NRN9 209 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 KLHL3Q9UH77 587 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 CTNND2Q9UQB3 1225 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 SLC17A4Q9Y2C5 497 aa15.76■□□□□ 0.11
PDLIM7-210ENST00000503827 LDLRP01130 860 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 VARSP26640 1264 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 SDC4P31431 198 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 CSNK1DP48730 415 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 POLD2P49005 469 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 FOXM1Q08050 763 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 EXOC3L4Q17RC7 722 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 HSCBQ8IWL3 235 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 GALNT6Q8NCL4 622 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 OR2M4Q96R27 311 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 SLC25A23Q9BV35 468 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 STN1Q9H668 368 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 MAP10Q9P2G4 905 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 RCOR3Q9P2K3 495 aaPredicted RBP15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 ERRFI1Q9UJM3 462 aaPredicted RBP15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 DNAJC12Q9UKB3 198 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 PLEKHM1Q9Y4G2 1056 aa15.75■□□□□ 0.11
PDLIM7-210ENST00000503827 A6NCN8 305 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 GOLGA6CA6NDK9 693 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 GOLGA6BA6NDN3 693 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 MAP3K6O95382 1288 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 FGFR1OPO95684 399 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 CCNYL3P0C7X3 344 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 GOLGA6DP0CG33 693 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 PNMA6AP0CW24 399 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 ZNF28P17035 718 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 MAPK9P45984 424 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 STX17P56962 302 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 HHEXQ03014 270 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 CCDC14Q49A88 953 aa15.74■□□□□ 0.11
PDLIM7-210ENST00000503827 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms