RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 A0A1B0GVM2 712 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 TCAF2A6NFQ2 919 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 H0YC42 278 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 CCL22O00626 93 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 TSPAN3O60637 253 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 WFS1O76024 890 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 CLTBP09497 229 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 LAG3P18627 525 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 GLDCP23378 1020 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 PPP3CCP48454 512 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 IDH3AP50213 366 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 CCT8P50990 548 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 PRAMEP78395 509 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 ACVR1Q04771 509 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 LAMB3Q13751 1172 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 GALNT3Q14435 633 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 TBCCQ15814 346 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 TMEM164Q5U3C3 297 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 DNAJB7Q7Z6W7 309 aaPredicted RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 DDX53Q86TM3 631 aaKnown RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 CILP2Q8IUL8 1156 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 ZNF781Q8N8C0 355 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 SMYD1Q8NB12 490 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 FAM13CQ8NE31 585 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 BLOC1S5Q8TDH9 187 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 AUTS2Q8WXX7 1259 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 DDX50Q9BQ39 737 aaKnown RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 CDH19Q9H159 772 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP46-204ENST00000503060 XPR1Q9UBH6 696 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 SORCS3Q9UPU3 1222 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 APOBEC2Q9Y235 224 aaKnown RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 LTBP2Q14767 1821 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 LRRC72A6NJI9 287 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 NDST3O95803 873 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 ENO1P06733 434 aaKnown RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 SLC8A1P32418 973 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 ELF1P32519 619 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 MTHFRP42898 656 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 ARPC4P59998 168 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 RFTN1Q14699 578 aaPredicted RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 SETD3Q86TU7 594 aaPredicted RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 TCEAL8Q8IYN2 117 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 CMTR2Q8IYT2 770 aaKnown RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 ESX1Q8N693 406 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 AGAP11Q8TF27 550 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 EZH1Q92800 747 aaPredicted RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 PEX13Q92968 403 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 SLC35B4Q969S0 331 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 TRIB3Q96RU7 358 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 NDNQ99608 321 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 OLFM1Q99784 485 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 SCHIP1Q9P0W5 487 aaPredicted RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
USP46-204ENST00000503060 LAMP5Q9UJQ1 280 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 TBC1D30Q9Y2I9 924 aa11.59□□□□□ -0.55
USP46-204ENST00000503060 OR51F1A6NGY5 319 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 GYG2O15488 501 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 GSC2O15499 205 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 DLX3O60479 287 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 S1PR4O95977 384 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 RGRP47804 291 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 GRIA4P48058 902 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 KPNA2P52292 529 aaKnown RBP11.58□□□□□ -0.56
USP46-204ENST00000503060 USP4Q13107 963 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 UBAP2LQ14157 1087 aaKnown RBP11.58□□□□□ -0.56
USP46-204ENST00000503060 C16orf59Q7L2K0 433 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 TMEM150AQ86TG1 271 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 HERC6Q8IVU3 1022 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 SPATA6LQ8N4H0 392 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 TRIML2Q8N7C3 387 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 SPERTQ8NA61 448 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 HEXDCQ8WVB3 486 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 TSPAN17Q96FV3 270 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 DNAJC1Q96KC8 554 aaKnown RBP11.58□□□□□ -0.56
USP46-204ENST00000503060 TBATAQ96M53 351 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 NSMCE3Q96MG7 304 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 DRC3Q9H069 523 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 MRPL46Q9H2W6 279 aaKnown RBP11.58□□□□□ -0.56
USP46-204ENST00000503060 SMPD4Q9NXE4 827 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 TAS2R1Q9NYW7 299 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 CROTQ9UKG9 612 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 RIMKLBQ9ULI2 386 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 INSL5Q9Y5Q6 135 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 ARL5AQ9Y689 179 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 PRR5-ARHGAP8B1AHC4 643 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 ATP6V1G1O75348 118 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 APBB3O95704 486 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 IL33O95760 270 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 MBL2P11226 248 aaPredicted RBP11.58□□□□□ -0.56
USP46-204ENST00000503060 MYL4P12829 197 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 CR2P20023 1033 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 EPHB3P54753 998 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 WDR5P61964 334 aaKnown RBP11.58□□□□□ -0.56
USP46-204ENST00000503060 ARHGAP8P85298 464 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 RCN2Q14257 317 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 CYTH1Q15438 398 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 VWA5B1Q5TIE3 1220 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 HECTD2Q5U5R9 776 aa11.58□□□□□ -0.56
USP46-204ENST00000503060 RNF219Q5W0B1 726 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms