RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CBX8Q9HC52 389 aa11.76□□□□□ -0.53
NUDCD3-211ENST00000497978 GOLGA6AQ9NYA3 693 aa11.76□□□□□ -0.53
NUDCD3-211ENST00000497978 LRIT1Q9P2V4 623 aa11.76□□□□□ -0.53
NUDCD3-211ENST00000497978 CAPN11Q9UMQ6 739 aa11.76□□□□□ -0.53
NUDCD3-211ENST00000497978 LUC7L2Q9Y383 392 aaKnown RBP11.76□□□□□ -0.53
NUDCD3-211ENST00000497978 SYCE3A1L190 88 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 PMS2P1A4D2B8 440 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 NUDT21O43809 227 aaKnown RBP11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 NOBOXO60393 691 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 JMJD7P0C870 316 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 CCNB1P14635 433 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 CES1P23141 567 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 UGT1A5P35504 534 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 PBX1P40424 430 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 ETV3P41162 512 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 SKOR1P84550 965 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 BIRC2Q13490 618 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 HLTFQ14527 1009 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 TXNRD3NBQ6F5E7 133 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 RAET1GQ6H3X3 334 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 TIGD7Q6NT04 549 aaPredicted RBP11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 ALKBH5Q6P6C2 394 aaKnown RBP11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 HSD11B1LQ7Z5J1 315 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 SPRED1Q7Z699 444 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 GPBAR1Q8TDU6 330 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 TMEM159Q96B96 161 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 WBP1Q96G27 269 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 POLR1EQ9GZS1 481 aaKnown RBP11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 SUDS3Q9H7L9 328 aaPredicted RBP11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 NT5MQ9NPB1 228 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 PCDHGA7Q9Y5G6 932 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 RNF215Q9Y6U7 377 aa11.75□□□□□ -0.53
NUDCD3-211ENST00000497978 A0A087X0T9 212 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 NPIPB15A6NHN6 443 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 RHPN2P1A8MT19 583 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CEACAM5P06731 702 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 FAM228BP0C875 321 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CTPS1P17812 591 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CA4P22748 312 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 LHCGRP22888 699 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 TEAD1P28347 426 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 SLC5A2P31639 672 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 GJC1P36383 396 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 GARSP41250 739 aaKnown RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 GPR1P46091 355 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 GNPDA1P46926 289 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 EPHB1P54762 984 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CDK3Q00526 305 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CFHR1Q03591 330 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 ZSCAN23Q3MJ62 389 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CCDC81Q6ZN84 652 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 Q6ZVL8 140 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 MAP7D3Q8IWC1 876 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 PELI3Q8N2H9 469 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CBARPQ8N350 705 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 TEX26Q8N6G2 289 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 KCTD6Q8NC69 237 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CCL4L1Q8NHW4 92 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 ZNF564Q8TBZ8 553 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 ZDHHC1Q8WTX9 485 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 SNRNP27Q8WVK2 155 aaKnown RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 MCCC1Q96RQ3 725 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 CMKLR1Q99788 373 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 SEMA3CQ99985 751 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 FRMD8Q9BZ67 464 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 TRNAU1APQ9NX07 287 aaKnown RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 AKAP7Q9P0M2 348 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 PISDQ9UG56 409 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 LCMT1Q9UIC8 334 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 DNPEPQ9ULA0 475 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 ATXN7L1Q9ULK2 861 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 SUFUQ9UMX1 484 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 PPIL1Q9Y3C6 166 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 LOXL2Q9Y4K0 774 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 UNC13CQ8NB66 2214 aa11.74□□□□□ -0.53
NUDCD3-211ENST00000497978 K7ENP7 123 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 MFSD11O43934 449 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 C1QL1O75973 258 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 PYGLP06737 847 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 TPM3P06753 285 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 ZNF30P17039 623 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 FECHP22830 423 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 IL4RP24394 825 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 CCNCP24863 283 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 ZFP36L1Q07352 338 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 DPTQ07507 201 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 GALNT2Q10471 571 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 CLN3Q13286 438 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 DPYSL3Q14195 570 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 PAFAH1B3Q15102 231 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 PDK2Q15119 407 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 IFI16Q16666 785 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 MAP9Q49MG5 647 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 ANKRD20A8PQ5CZ79 823 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 ZFYVE27Q5T4F4 411 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 PHF19Q5T6S3 580 aa11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 INO80CQ6PI98 192 aaPredicted RBP11.73□□□□□ -0.53
NUDCD3-211ENST00000497978 TSPAN33Q86UF1 283 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms