RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 LRRC71Q8N4P6 559 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 ASCC1Q8N9N2 400 aaKnown RBP13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 MCFD2Q8NI22 146 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 HEXDCQ8WVB3 486 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 BDH2Q9BUT1 245 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 CEP350Q5VT06 3117 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 ZCWPW2A0A1B0GU75 182 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 INO80B-WBP1J3KQ70 363 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 UGT2B11O75310 529 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 ICAM1P05362 532 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 GSK3BP49841 420 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 CEP78Q5JTW2 689 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 TSTD2Q5T7W7 516 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 FUNDC1Q8IVP5 155 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 ATG4CQ96DT6 458 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 LPIN3Q9BQK8 851 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 ZNF221Q9UK13 617 aa13.07□□□□□ -0.32
GAPVD1-220ENST00000497580 FAM95CA0A1B0GW59 222 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 PGK1P00558 417 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 GJB1P08034 283 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TCF3P15923 654 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.326e-10■□□□□ 10.4
GAPVD1-220ENST00000497580 PRKCAP17252 672 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 GSTM2P28161 218 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ARSFP54793 590 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ATP6V0D1P61421 351 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 IL5RAQ01344 420 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TNFAIP2Q03169 654 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 LIPEQ05469 1076 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 POU6F1Q14863 301 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ACAP2Q15057 778 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 SKIV2LQ15477 1246 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 AASDHQ4L235 1098 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 MAP1SQ66K74 1059 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 FAM45BPQ6NSW5 357 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 PIWIL4Q7Z3Z4 852 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 MICU2Q8IYU8 434 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC38A6Q8IZM9 456 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ZNF555Q8NEP9 628 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 FAM45AQ8TCE6 357 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TMBIM1Q969X1 311 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TMEM246Q9BRR3 403 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TTYH2Q9BSA4 534 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ASPSCR1Q9BZE9 553 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 C2orf40Q9H1Z8 148 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ALG2Q9H553 416 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 RNF146Q9NTX7 359 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 SNTG2Q9NY99 539 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 MAP10Q9P2G4 905 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 RABL2BQ9UNT1 228 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 BTRCQ9Y297 605 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ADGRA2Q96PE1 1338 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 NFICP08651 508 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 MYCLP1P12525 358 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 CAP2P40123 477 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ADARB1P78563 741 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 CAPSQ13938 189 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 CTF1Q16619 201 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 FBXO48Q5FWF7 155 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 SLC22A15Q8IZD6 547 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 FKBP10Q96AY3 582 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TUBGCP3Q96CW5 907 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 C3orf30Q96M34 536 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 GAD1Q99259 594 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 FEM1AQ9BSK4 669 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ACTR3BQ9P1U1 418 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 FADS2O95864 444 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 DBTP11182 482 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 HOXA10P31260 410 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 MAGEA12P43365 314 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 CLK1P49759 484 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 GP2P55259 537 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 FAAH2Q6GMR7 532 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ZCCHC8Q6NZY4 707 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ZC3HC1Q86WB0 502 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TMEM151AQ8N4L1 468 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 RNF149Q8NC42 400 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 OR6Q1Q8NGQ2 317 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 CNIH3Q8TBE1 160 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 NDRG1Q92597 394 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 HSFY1Q96LI6 401 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 BBS2Q9BXC9 721 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 IDI2Q9BXS1 227 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 DNAI2Q9GZS0 605 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 WDR6Q9NNW5 1121 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 PLSCR3Q9NRY6 295 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TESMINQ9Y4I5 508 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 ANGPTL3Q9Y5C1 460 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 U3KQV3 271 aa13.06□□□□□ -0.32
GAPVD1-220ENST00000497580 TRIM64BA6NI03 449 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 ZNF99A8MXY4 864 aaPredicted RBP13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 HS6ST1O60243 411 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 AHSGP02765 367 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 NR3C2P08235 984 aa13.05□□□□□ -0.32
GAPVD1-220ENST00000497580 POLR2EP19388 210 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms