RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 KCTD5Q9NXV2 234 aa18.32■□□□□ 0.52
TSSC4-210ENST00000496468 HCN4Q9Y3Q4 1203 aa18.32■□□□□ 0.52
TSSC4-210ENST00000496468 A0A1W2PPC4 97 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 SLC31A1O15431 190 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 LDB2O43679 373 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 BUD23O43709 281 aaKnown RBP18.31■□□□□ 0.52
TSSC4-210ENST00000496468 ADRA1DP25100 572 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 CD27P26842 260 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 PTGER3P43115 390 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 DCDC1P59894 354 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 TUBB4BP68371 445 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 CREB5Q02930 508 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 HLTFQ14527 1009 aaKnown RBP eCLIP18.31■□□□□ 0.52
TSSC4-210ENST00000496468 AGERQ15109 404 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 IRF4Q15306 451 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 TRADDQ15628 312 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 BBS9Q3SYG4 887 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 PCID2Q5JVF3 399 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 WDR45BQ5MNZ6 344 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 ARMC3Q5W041 872 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 ALS2CLQ60I27 953 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 Q6ZVL8 140 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 ZNF765Q7L2R6 523 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 IFT20Q8IY31 132 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 NRSN1Q8IZ57 195 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 RGL4Q8IZJ4 473 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 OR4K2Q8NGD2 314 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 FBXO25Q8TCJ0 367 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 PTCD2Q8WV60 388 aaKnown RBP18.31■□□□□ 0.52
TSSC4-210ENST00000496468 ASB12Q8WXK4 309 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 ZC3H10Q96K80 434 aaKnown RBP18.31■□□□□ 0.52
TSSC4-210ENST00000496468 EPC1Q9H2F5 836 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 BPIFA1Q9NP55 256 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 IL17CQ9P0M4 197 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 CD84Q9UIB8 345 aa18.31■□□□□ 0.52
TSSC4-210ENST00000496468 FNDC3AQ9Y2H6 1198 aaKnown RBP18.31■□□□□ 0.52
TSSC4-210ENST00000496468 ATXN2Q99700 1313 aaKnown RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 CCDC78A2IDD5 438 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 RGSL1A5PLK6 1076 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 MROH6A6NGR9 719 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 SDR42E2A6NKP2 422 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 PAK4O96013 591 aaPredicted RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 PCCBP05166 539 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 BPIP17213 487 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 SPAM1P38567 509 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 DHX9Q08211 1270 aaKnown RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 CUL1Q13616 776 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 LRRC14Q15048 493 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 FNBP1LQ5T0N5 605 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 ZDHHC20Q5W0Z9 365 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 RFLNAQ6ZTI6 216 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 NLRP9Q7RTR0 991 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 TECPR1Q7Z6L1 1165 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 CBARPQ8N350 705 aaPredicted RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 MPP5Q8N3R9 675 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 TP53I13Q8NBR0 393 aaPredicted RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 OR13C4Q8NGS5 318 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 STYXQ8WUJ0 223 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 IFT81Q8WYA0 676 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 SERAC1Q96JX3 654 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 DNAJC1Q96KC8 554 aaKnown RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 PWWP2AQ96N64 755 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 PLEKHG4BQ96PX9 1271 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 CDH19Q9H159 772 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 MIR1-1HGQ9H1L0 117 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 MRM3Q9HC36 420 aaKnown RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 GDF3Q9NR23 364 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 NFKBIL1Q9UBC1 381 aaPredicted RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 EIF2B4Q9UI10 523 aaKnown RBP18.3■□□□□ 0.52
TSSC4-210ENST00000496468 RAB23Q9ULC3 237 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 SOX13Q9UN79 622 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 KCTD3Q9Y597 815 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 MAD1L1Q9Y6D9 718 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 SPAG17Q6Q759 2223 aa18.3■□□□□ 0.52
TSSC4-210ENST00000496468 PRAMEF26H0Y7S4 382 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 RAD51BO15315 384 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 BANF1O75531 89 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 IGFALSP35858 605 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 HADHAP40939 763 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 TSTD2Q5T7W7 516 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 RAET1GQ6H3X3 334 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 CENPUQ71F23 418 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 RUBCNQ92622 972 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 ATOH1Q92858 354 aaPredicted RBP18.29■□□□□ 0.52
TSSC4-210ENST00000496468 AP2M1Q96CW1 435 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 STAMBPL1Q96FJ0 436 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 SLC6A18Q96N87 628 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 LENG8Q96PV6 779 aaPredicted RBP18.29■□□□□ 0.52
TSSC4-210ENST00000496468 C19orf43Q9BQ61 176 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 PHACTR1Q9C0D0 580 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 EBF2Q9HAK2 575 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 ZDHHC18Q9NUE0 388 aa18.29■□□□□ 0.52
TSSC4-210ENST00000496468 MTRF1LQ9UGC7 380 aaKnown RBP18.29■□□□□ 0.52
TSSC4-210ENST00000496468 SMG5Q9UPR3 1016 aaKnown RBP18.29■□□□□ 0.52
TSSC4-210ENST00000496468 FPGTO14772 594 aa18.28■□□□□ 0.52
TSSC4-210ENST00000496468 ITPKAP23677 461 aa18.28■□□□□ 0.52
TSSC4-210ENST00000496468 TMPRSS15P98073 1019 aa18.28■□□□□ 0.52
TSSC4-210ENST00000496468 PTPRCAPQ14761 206 aa18.28■□□□□ 0.52
TSSC4-210ENST00000496468 LPAL2Q16609 132 aa18.28■□□□□ 0.52
TSSC4-210ENST00000496468 SKIDA1Q1XH10 827 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms