RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 LRRC66Q68CR7 880 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 RAET1GQ6H3X3 334 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 TIGD7Q6NT04 549 aaPredicted RBP14.26□□□□□ -0.13
VTI1A-209ENST00000496445 OGFOD3Q6PK18 319 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 TAF8Q7Z7C8 310 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 B3GNT8Q7Z7M8 397 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 NRROSQ86YC3 692 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 LSMEM2Q8N112 164 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.26□□□□□ -0.13
VTI1A-209ENST00000496445 ARRDC2Q8TBH0 407 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 GRAMD1AQ96CP6 724 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 TSGA13Q96PP4 275 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 DEF6Q9H4E7 631 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 SPTLC3Q9NUV7 552 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 DTLQ9NZJ0 730 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 CD84Q9UIB8 345 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 ST14Q9Y5Y6 855 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 UNC13CQ8NB66 2214 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 C3orf70A6NLC5 250 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-209ENST00000496445 B4DGG1 531 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 D6RAR5 112 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 AKR1B10O60218 316 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 PRLP01236 227 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 RPLP0P05388 317 aaKnown RBP14.25□□□□□ -0.13
VTI1A-209ENST00000496445 KDELR1P24390 212 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 CCNCP24863 283 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 NFKBIAP25963 317 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 TEAD1P28347 426 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 ERVPABLB-1P60509 514 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 CCL7P80098 99 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 PTSQ03393 145 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 HLTFQ14527 1009 aaKnown RBP eCLIP14.25□□□□□ -0.13
VTI1A-209ENST00000496445 MESDQ14696 234 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 FAM182AQ5T1J6 154 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 CERCAMQ5T4B2 595 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 MAP7D3Q8IWC1 876 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 PLD5Q8N7P1 536 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 RNF214Q8ND24 703 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 ZNF248Q8NDW4 579 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 FAM46DQ8NEK8 389 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 HDAC11Q96DB2 347 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 NAF1Q96HR8 494 aaKnown RBP14.25□□□□□ -0.13
VTI1A-209ENST00000496445 SLC46A1Q96NT5 459 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 LGMNQ99538 433 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 TSPY26PQ9H489 355 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 CARS2Q9HA77 564 aaKnown RBP14.25□□□□□ -0.13
VTI1A-209ENST00000496445 PHPT1Q9NRX4 125 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-209ENST00000496445 RBM22Q9NW64 420 aaKnown RBP eCLIP14.25□□□□□ -0.13
VTI1A-209ENST00000496445 KCTD5Q9NXV2 234 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 AMACRQ9UHK6 382 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 LCMT1Q9UIC8 334 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 SUFUQ9UMX1 484 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 CHKBQ9Y259 395 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 TTLL3Q9Y4R7 772 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 PCDHGA8Q9Y5G5 932 aa14.25□□□□□ -0.13
VTI1A-209ENST00000496445 FASNP49327 2511 aaKnown RBP14.25□□□□□ -0.13
VTI1A-209ENST00000496445 GOLGA6CA6NDK9 693 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 GOLGA6BA6NDN3 693 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 CAPN8A6NHC0 703 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 MTA2O94776 668 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 MMP2P08253 660 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 GOLGA6DP0CG33 693 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 CCNB1P14635 433 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 GNPDA1P46926 289 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 POLD2P49005 469 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 SKOR1P84550 965 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 DPTQ07507 201 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 ZBTB17Q13105 803 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 TSR1Q2NL82 804 aaKnown RBP14.24□□□□□ -0.13
VTI1A-209ENST00000496445 C14orf28Q4W4Y0 310 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 CCDC13Q8IYE1 715 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 OR6C4Q8NGE1 309 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 SLC35G2Q8TBE7 412 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 GPBAR1Q8TDU6 330 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 LIN37Q96GY3 246 aaPredicted RBP14.24□□□□□ -0.13
VTI1A-209ENST00000496445 FCRL3Q96P31 734 aaPredicted RBP14.24□□□□□ -0.13
VTI1A-209ENST00000496445 RNF157Q96PX1 679 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 GFM1Q96RP9 751 aaKnown RBP14.24□□□□□ -0.13
VTI1A-209ENST00000496445 AGAP2Q99490 1192 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 FOXP3Q9BZS1 431 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 ABCG8Q9H221 673 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 LRRN3Q9H3W5 708 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 SUDS3Q9H7L9 328 aaPredicted RBP14.24□□□□□ -0.13
VTI1A-209ENST00000496445 NHEJ1Q9H9Q4 299 aaPredicted RBP14.24□□□□□ -0.13
VTI1A-209ENST00000496445 THSD1Q9NS62 852 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 SPATS2LQ9NUQ6 558 aaKnown RBP14.24□□□□□ -0.13
VTI1A-209ENST00000496445 GOLGA6AQ9NYA3 693 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 APPL1Q9UKG1 709 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 SLC17A4Q9Y2C5 497 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 RNF215Q9Y6U7 377 aa14.24□□□□□ -0.13
VTI1A-209ENST00000496445 CCDC187A0A096LP49 1063 aa14.23□□□□□ -0.13
VTI1A-209ENST00000496445 LRRD1A4D1F6 860 aa14.23□□□□□ -0.13
VTI1A-209ENST00000496445 CDRT15L2A8MXV6 281 aa14.23□□□□□ -0.13
VTI1A-209ENST00000496445 PDE2AO00408 941 aaPredicted RBP14.23□□□□□ -0.13
VTI1A-209ENST00000496445 GLB1P16278 677 aa14.23□□□□□ -0.13
VTI1A-209ENST00000496445 ZNF30P17039 623 aa14.23□□□□□ -0.13
VTI1A-209ENST00000496445 MX2P20592 715 aa14.23□□□□□ -0.13
VTI1A-209ENST00000496445 AK4P27144 223 aaPredicted RBP14.23□□□□□ -0.13
VTI1A-209ENST00000496445 STC1P52823 247 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms