RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 EXT2Q93063 718 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 NPAS2Q99743 824 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 DDX50Q9BQ39 737 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 TDRD1Q9BXT4 1180 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 CWH43Q9H720 699 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 TAS2R13Q9NYV9 303 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 EPS15L1Q9UBC2 864 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 ANKRD36A6QL64 1941 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 H3BNC9 293 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 H3BNX3 289 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 PEX1O43933 1283 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 NDUFS3O75489 264 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 SRP72O76094 671 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 RHOBTB1O94844 696 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 GFAPP14136 432 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 CR2P20023 1033 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 CORO1AP31146 461 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 KCNC1P48547 511 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 ZNF140P52738 457 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 STX1BP61266 288 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 GEN1Q17RS7 908 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 LRRC36Q1X8D7 754 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 UNC50Q53HI1 259 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 LPCAT4Q643R3 524 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 GK5Q6ZS86 529 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 TMEM126BQ8IUX1 230 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 PTGR2Q8N8N7 351 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 OR4K2Q8NGD2 314 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 STAG3L4Q8TBR4 150 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 BCL7CQ8WUZ0 217 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 USP13Q92995 863 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 C19orf60Q96EN9 201 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 PRICKLE1Q96MT3 831 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 ADGRE3Q9BY15 652 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 TNFRSF12AQ9NP84 129 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 SPATS2LQ9NUQ6 558 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 HSFX1Q9UBD0 423 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 AFF4Q9UHB7 1163 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 PACSIN3Q9UKS6 424 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 AGO1Q9UL18 857 aaKnown RBP11.06□□□□□ -0.64
CMSS1-208ENST00000496116 ACTL7AQ9Y615 435 aa11.06□□□□□ -0.64
CMSS1-208ENST00000496116 HTTP42858 3142 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 CBX4O00257 560 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 UBFD1O14562 309 aaKnown RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ADAM12O43184 909 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 STC2O76061 302 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 PYGLP06737 847 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 FGF4P08620 206 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 XRCC1P18887 633 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 PEX2P28328 305 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ATP4BP51164 291 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 PKNOX1P55347 436 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ATP6V0D1P61421 351 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 NAA20P61599 178 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 TIAL1Q01085 375 aaKnown RBP eCLIP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 RAD51Q06609 339 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 CEACAM7Q14002 265 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 PFKFB4Q16877 469 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 AGKQ53H12 422 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ADGRF1Q5T601 910 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 CLEC6AQ6EIG7 209 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 HERC6Q8IVU3 1022 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 PQLC1Q8N2U9 271 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ICA1LQ8NDH6 482 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 TET1Q8NFU7 2136 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 EXOC2Q96KP1 924 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 CAPNS2Q96L46 248 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 LRGUKQ96M69 825 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 SLC25A23Q9BV35 468 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 DERL2Q9GZP9 239 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 MUC3BQ9H195 1237 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 POLR3BQ9NW08 1133 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 HACD3Q9P035 362 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 CCDC167Q9P0B6 97 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 SUFUQ9UMX1 484 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 TBC1D30Q9Y2I9 924 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 LCHNA4D1U4 455 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 SYCE1LA8MT33 242 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 TRIM38O00635 465 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 KERAO60938 352 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 BCAS2O75934 225 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 SNRPB2P08579 225 aaKnown RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 UQCRBP14927 111 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 RPL17P18621 184 aaKnown RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 LPOP22079 712 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 FMO4P31512 558 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 RGRP47804 291 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ALDH1A3P47895 512 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ACADVLP49748 655 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 RPL26P61254 145 aaKnown RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 PSME3P61289 254 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 MED21Q13503 144 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 ARHGEF6Q15052 776 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 PPP1R3AQ16821 1122 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 GRAMD1BQ3KR37 738 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 RARS2Q5T160 578 aaKnown RBP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 LARP4Q71RC2 724 aaKnown RBP eCLIP11.05□□□□□ -0.64
CMSS1-208ENST00000496116 MFN1Q8IWA4 741 aa11.05□□□□□ -0.64
CMSS1-208ENST00000496116 CATSPER1Q8NEC5 780 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms