RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 POLR1BQ9H9Y6 1135 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 PCDH9Q9HC56 1237 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 CYP4F12Q9HCS2 524 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 LUC7LQ9NQ29 371 aaKnown RBP24.19■■□□□ 1.46
HLA-C-209ENST00000495835 TRNAU1APQ9NX07 287 aaKnown RBP24.19■■□□□ 1.46
HLA-C-209ENST00000495835 TTLL3Q9Y4R7 772 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 PCDHB1Q9Y5F3 818 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 HEY1Q9Y5J3 304 aa24.19■■□□□ 1.46
HLA-C-209ENST00000495835 COL27A1Q8IZC6 1860 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-209ENST00000495835 CAPN8A6NHC0 703 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 PPP1R12AO14974 1030 aaPredicted RBP24.18■■□□□ 1.46
HLA-C-209ENST00000495835 RRP8O43159 456 aaKnown RBP24.18■■□□□ 1.46
HLA-C-209ENST00000495835 BRINP1O60477 761 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 PRLP01236 227 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 JCHAINP01591 159 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 CEACAM5P06731 702 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 CTPS1P17812 591 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 MAGEA1P43355 309 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 NR2C2P49116 596 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 CDK3Q00526 305 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 NIPAL4Q0D2K0 466 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 IHHQ14623 411 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 TBC1D25Q3MII6 688 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 LRRC66Q68CR7 880 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 ADAMTSL4Q6UY14 1074 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 GPBAR1Q8TDU6 330 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 LGMNQ99538 433 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 FRMD8Q9BZ67 464 aaPredicted RBP24.18■■□□□ 1.46
HLA-C-209ENST00000495835 MRPL40Q9NQ50 206 aaKnown RBP24.18■■□□□ 1.46
HLA-C-209ENST00000495835 CHKBQ9Y259 395 aa24.18■■□□□ 1.46
HLA-C-209ENST00000495835 NTN3O00634 580 aaPredicted RBP24.17■■□□□ 1.46
HLA-C-209ENST00000495835 PSTPIP1O43586 416 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 SPOPO43791 374 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 KRT1P04264 644 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 GLB1P16278 677 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 ERVPABLB-1P60509 514 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 KCTD16Q68DU8 428 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 RAET1GQ6H3X3 334 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 LRRC69Q6ZNQ3 347 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 KYQ8NBH2 561 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 FAM46DQ8NEK8 389 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 AP2M1Q96CW1 435 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 CALR3Q96L12 384 aaKnown RBP24.17■■□□□ 1.46
HLA-C-209ENST00000495835 OLFM3Q96PB7 478 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 ADGRE3Q9BY15 652 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 TMEM168Q9H0V1 697 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 ABCG8Q9H221 673 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 APPL1Q9UKG1 709 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 SLC17A4Q9Y2C5 497 aa24.17■■□□□ 1.46
HLA-C-209ENST00000495835 A0A0A6YYK5 440 aaPredicted RBP24.16■■□□□ 1.46
HLA-C-209ENST00000495835 RGSL1A5PLK6 1076 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 ANKRD66B4E2M5 251 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 TMX2-CTNND1H3BSU7 103 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 KCNK1O00180 336 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 TLX3O43711 291 aaPredicted RBP24.16■■□□□ 1.46
HLA-C-209ENST00000495835 COMTP21964 271 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 GPR1P46091 355 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 STC1P52823 247 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 AP1B1Q10567 949 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 SPIDRQ14159 915 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 TFDP2Q14188 446 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 SLC14A2Q15849 920 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 TAZQ16635 292 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 COL28A1Q2UY09 1125 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 NYAP1Q6ZVC0 841 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 CNTD1Q8N815 330 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 KIAA1524Q8TCG1 905 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 HNRNPLLQ8WVV9 542 aaKnown RBP24.16■■□□□ 1.46
HLA-C-209ENST00000495835 SCARF2Q96GP6 870 aaPredicted RBP24.16■■□□□ 1.46
HLA-C-209ENST00000495835 GSDMCQ9BYG8 508 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 CARS2Q9HA77 564 aaKnown RBP24.16■■□□□ 1.46
HLA-C-209ENST00000495835 SIRPGQ9P1W8 387 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 MOSPD1Q9UJG1 213 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 ENTPD2Q9Y5L3 495 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 ALG6Q9Y672 507 aa24.16■■□□□ 1.46
HLA-C-209ENST00000495835 IVLP07476 585 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 MMP2P08253 660 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 CYLC1P35663 651 aaPredicted RBP24.15■■□□□ 1.46
HLA-C-209ENST00000495835 MLLT3P42568 568 aaPredicted RBP24.15■■□□□ 1.46
HLA-C-209ENST00000495835 GABREP78334 506 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 SKOR1P84550 965 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 ILF3Q12906 894 aaKnown RBP eCLIP24.15■■□□□ 1.46
HLA-C-209ENST00000495835 SPA17Q15506 151 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 C19orf48Q6RUI8 117 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 RFX6Q8HWS3 928 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 RNF25Q96BH1 459 aaPredicted RBP24.15■■□□□ 1.46
HLA-C-209ENST00000495835 MRFAP1L1Q96HT8 127 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 MLPHQ9BV36 600 aaPredicted RBP24.15■■□□□ 1.46
HLA-C-209ENST00000495835 PCDHGA8Q9Y5G5 932 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 ZFYVE26Q68DK2 2539 aa24.15■■□□□ 1.46
HLA-C-209ENST00000495835 ARHGEF17Q96PE2 2063 aaPredicted RBP24.14■■□□□ 1.46
HLA-C-209ENST00000495835 NUDT21O43809 227 aaKnown RBP24.14■■□□□ 1.45
HLA-C-209ENST00000495835 CD86P42081 329 aa24.14■■□□□ 1.45
HLA-C-209ENST00000495835 CDKN2BP42772 138 aa24.14■■□□□ 1.45
HLA-C-209ENST00000495835 ABCG1P45844 678 aa24.14■■□□□ 1.45
HLA-C-209ENST00000495835 NOP2P46087 812 aaKnown RBP24.14■■□□□ 1.45
HLA-C-209ENST00000495835 ZBTB17Q13105 803 aa24.14■■□□□ 1.45
HLA-C-209ENST00000495835 PTPRRQ15256 657 aa24.14■■□□□ 1.45
HLA-C-209ENST00000495835 C14orf28Q4W4Y0 310 aa24.14■■□□□ 1.45
HLA-C-209ENST00000495835 CERCAMQ5T4B2 595 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms