RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PLD1Q13393 1074 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 LAPTM5Q13571 262 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 C16orf72Q14CZ0 275 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 INSCQ1MX18 579 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 AAK1Q2M2I8 961 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 TWIST2Q8WVJ9 160 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 TSPAN17Q96FV3 270 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 SERPINB11Q96P15 392 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 SLAMF8Q9P0V8 285 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 FKBPLQ9UIM3 349 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 SLC30A1Q9Y6M5 507 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 HTTP42858 3142 aa13.45□□□□□ -0.26
GPC1-209ENST00000495100 TBKBP1A7MCY6 615 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 KPNA6O60684 536 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 CLASP2O75122 1294 aaKnown RBP13.44□□□□□ -0.26
GPC1-209ENST00000495100 RBP1P09455 135 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 UGT1A1P22309 533 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 UGT1A4P22310 534 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 CCND3P30281 292 aaPredicted RBP13.44□□□□□ -0.26
GPC1-209ENST00000495100 AXLP30530 894 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 UGT1A3P35503 534 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 UGT1A5P35504 534 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 CRHR2Q13324 411 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 TUSC3Q13454 348 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 SLC44A4Q53GD3 710 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 SCLYQ96I15 445 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 SPAG4Q9NPE6 437 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 CATSPERZQ9NTU4 200 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 DOLKQ9UPQ8 538 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 DERAQ9Y315 318 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 F5P12259 2224 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 GLTPD2A6NH11 291 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 OR4F21O95013 312 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 HNRNPCP07910 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
GPC1-209ENST00000495100 GNAO1P09471 354 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 KCNE1P15382 129 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 GRIA2P42262 883 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 PRKCZQ05513 592 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 CPSF6Q16630 551 aaKnown RBP eCLIP13.44□□□□□ -0.26
GPC1-209ENST00000495100 TSTD2Q5T7W7 516 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 TIFABQ6ZNK6 161 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 TSPAN14Q8NG11 270 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 MYLIPQ8WY64 445 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 GATA6Q92908 595 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 THAP11Q96EK4 314 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 ASIC4Q96FT7 647 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 GLT1D1Q96MS3 346 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 OSBPL2Q9H1P3 480 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 RANBP2P49792 3224 aaKnown RBP13.44□□□□□ -0.26
GPC1-209ENST00000495100 A0A1B0GTL3 188 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
GPC1-209ENST00000495100 TFPTP0C1Z6 253 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 OR1D2P34982 312 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 IST1P53990 364 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 OXCT1P55809 520 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 ROR2Q01974 943 aaKnown RBP13.44□□□□□ -0.26
GPC1-209ENST00000495100 TRAF2Q12933 501 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 UPP1Q16831 310 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 GPR107Q5VW38 600 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 STEAP4Q687X5 459 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 LSMEM2Q8N112 164 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 ATP6V0D2Q8N8Y2 350 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 KDM1BQ8NB78 822 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 PNPT1Q8TCS8 783 aaKnown RBP13.44□□□□□ -0.26
GPC1-209ENST00000495100 FBXL20Q96IG2 436 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 VAT1Q99536 393 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 ADAM28Q9UKQ2 775 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 FCF1Q9Y324 198 aaKnown RBP13.44□□□□□ -0.26
GPC1-209ENST00000495100 MAGED1Q9Y5V3 778 aaPredicted RBP13.44□□□□□ -0.26
GPC1-209ENST00000495100 RAD54BQ9Y620 910 aa13.44□□□□□ -0.26
GPC1-209ENST00000495100 PRRG1O14668 218 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 RHOCP08134 193 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 CYP4B1P13584 511 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 SATB1Q01826 763 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 VARS2Q5ST30 1063 aaKnown RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 CWF19L1Q69YN2 538 aaKnown RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 TIGD7Q6NT04 549 aaPredicted RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 SCD5Q86SK9 330 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 KCTD14Q9BQ13 255 aaPredicted RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 GORASP1Q9BQQ3 440 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 POLR1EQ9GZS1 481 aaKnown RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 ZBTB26Q9HCK0 441 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 TBC1D13Q9NVG8 400 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 RCOR3Q9P2K3 495 aaPredicted RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 ATAD5Q96QE3 1844 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 TRIM38O00635 465 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 AZIN1O14977 448 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 CLOCKO15516 846 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 SH3BP5O60239 455 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 B4GALT3O60512 393 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 MTX2O75431 263 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 S100BP04271 92 aaPredicted RBP13.43□□□□□ -0.26
GPC1-209ENST00000495100 HMGCS1Q01581 520 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 PIGFQ07326 219 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 OR4L1Q8NH43 312 aa13.43□□□□□ -0.26
GPC1-209ENST00000495100 PTERQ96BW5 349 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms