RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ZNF570Q96NI8 536 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 RNPEPL1Q9HAU8 725 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 TCF7L2Q9NQB0 619 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 MRPL17Q9NRX2 175 aaKnown RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 EVLQ9UI08 416 aaPredicted RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 OBSL1O75147 1896 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 NOTCH4Q99466 2003 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ILVBLA1L0T0 632 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 AP3B1O00203 1094 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 TBX10O75333 385 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 RPP40O75818 363 aaKnown RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 FGF1P05230 155 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 MYOGP15173 224 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 GNAZP19086 355 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 AOC1P19801 751 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 NTHL1P78549 312 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 RCN1Q15293 331 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 C18orf21Q32NC0 220 aaPredicted RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 TCHHL1Q5QJ38 904 aaPredicted RBP10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ALG1LQ6GMV1 187 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 HPS6Q86YV9 775 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 TMC8Q8IU68 726 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 CMTM8Q8IZV2 173 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 HMGCLL1Q8TB92 370 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 DDI1Q8WTU0 396 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 PLD4Q96BZ4 506 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ERLEC1Q96DZ1 483 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 CORO1BQ9BR76 489 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 SLC46A2Q9BY10 475 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 LRRC3Q9BY71 257 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 CATSPERZQ9NTU4 200 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ANKRD6Q9Y2G4 727 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 RAP2CQ9Y3L5 183 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 KIAA1671Q9BY89 1806 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 PLXNA4Q9HCM2 1894 aa10.39□□□□□ -0.75
SAMM50-206ENST00000494795 ANKRD66B4E2M5 251 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 SPECC1L-ADORA2AF8WAN1 911 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 CDC7O00311 574 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 ZNF821O75541 412 aaPredicted RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 LTA4HP09960 611 aaKnown RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 MYL4P12829 197 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 MTHFD2P13995 350 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 RAG1P15918 1043 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 ITGB6P18564 788 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 HLA-DPA1P20036 260 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 CRABP2P29373 138 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 PRDX3P30048 256 aaKnown RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 AGTR2P50052 363 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 RASSF2P50749 326 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 KPNA1P52294 538 aaPredicted RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 YBX1P67809 324 aaKnown RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 ACVR1Q04771 509 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 KLF10Q13118 480 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 ARHGEF6Q15052 776 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 KLHDC10Q6PID8 442 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 DDX53Q86TM3 631 aaKnown RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 SIDT2Q8NBJ9 832 aaKnown RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 BIRC8Q96P09 236 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 MRPL57Q9BQC6 102 aaKnown RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 BOCQ9BWV1 1114 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 NSMCE4AQ9NXX6 385 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 SAGE1Q9NXZ1 904 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 AIM2O14862 343 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 PAPSS2O95340 614 aaPredicted RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 CD1DP15813 335 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 ITGAXP20702 1163 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 DPP6P42658 865 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 STC1P52823 247 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 PFKPQ01813 784 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 CUL3Q13618 768 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 PLA2G4EQ3MJ16 856 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 WLSQ5T9L3 541 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 SEL1L3Q68CR1 1132 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 RNF111Q6ZNA4 994 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 Q6ZNB5 142 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 RIPOR1Q6ZS17 1223 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 LYSMD3Q7Z3D4 306 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 TCEAL8Q8IYN2 117 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 PDZD8Q8NEN9 1154 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 TSNARE1Q96NA8 513 aa10.38□□□□□ -0.75
SAMM50-206ENST00000494795 SARS2Q9NP81 518 aaKnown RBP10.38□□□□□ -0.75
SAMM50-206ENST00000494795 ANTXRLA6NF34 631 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 HDAC3O15379 428 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 SUPT7LO94864 414 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 TIMP1P01033 207 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 ZNF37AP17032 561 aaPredicted RBP10.37□□□□□ -0.75
SAMM50-206ENST00000494795 FDXRP22570 491 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 PMLP29590 882 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 MC4RP32245 332 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 IRS1P35568 1242 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 EPHB3P54753 998 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 NME5P56597 212 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 BTKQ06187 659 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 CDH18Q13634 790 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
SAMM50-206ENST00000494795 VEPH1Q14D04 833 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 PFKFB4Q16877 469 aa10.37□□□□□ -0.75
SAMM50-206ENST00000494795 PREPLQ4J6C6 727 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms