RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SEPT9Q9UHD8 586 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 MOSPD1Q9UJG1 213 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 INTS6Q9UL03 887 aaKnown RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 TRPC5Q9UL62 973 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 NDUFAF1Q9Y375 327 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 HCN4Q9Y3Q4 1203 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PTPRJQ12913 1337 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PNMA8CA0A1B0GUJ8 204 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 K7ENM7 598 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PIK3R2O00459 728 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PI15O43692 258 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 NRP2O60462 931 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ZNF254O75437 659 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 WDPCPO95876 746 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 IL1RNP18510 177 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ARSFP54793 590 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 AP1S2P56377 157 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ISL1P61371 349 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 FOXD4Q12950 439 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PAGE2BQ5JRK9 111 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 TOR2AQ5JU69 321 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ZBTB37Q5TC79 503 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 DNAJC24Q6P3W2 148 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 KCNT2Q6UVM3 1135 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ADCK1Q86TW2 530 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PROSER1Q86XN7 944 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 RASGRP3Q8IV61 690 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 LINC00518Q8N0U6 118 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 SVOPLQ8N434 492 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 FNDC5Q8NAU1 212 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 MCOLN3Q8TDD5 553 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 CYGBQ8WWM9 190 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 CDHR1Q96JP9 859 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 MUS81Q96NY9 551 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 NODALQ96S42 347 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 RIT2Q99578 217 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 GABARAPL1Q9H0R8 117 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 TMEM168Q9H0V1 697 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 RNPEPQ9H4A4 650 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 CCNB1IP1Q9NPC3 277 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 GPRC5CQ9NQ84 441 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 SNX15Q9NRS6 342 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 IL37Q9NZH6 218 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 AFG3L2Q9Y4W6 797 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PARP14Q460N5 1801 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 TYW5A2RUC4 315 aaKnown RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 KCNU1A8MYU2 1149 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 M0R3G1 203 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 FXYD1O00168 92 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 SLC1A7O00341 560 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 NME4O00746 187 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 SNAP29O95721 258 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 TRUB2O95900 331 aaKnown RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 C1QBP02746 253 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 THRBP10828 461 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 BDNFP23560 247 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 MPSTP25325 297 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 HTR1EP28566 365 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PRDX5P30044 214 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 TEKQ02763 1124 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 KCNC3Q14003 757 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 POLD3Q15054 466 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 MLIPQ5VWP3 458 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ASPGQ86U10 573 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ZC3HC1Q86WB0 502 aaKnown RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 KLHDC8BQ8IXV7 354 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 RDH10Q8IZV5 341 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 POC5Q8NA72 575 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 FLCNQ8NFG4 579 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 SPPL2BQ8TCT7 592 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ARNTL2Q8WYA1 636 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 CIDECQ96AQ7 238 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 MFSD3Q96ES6 412 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 SDHCQ99643 169 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 BDH2Q9BUT1 245 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ALOXE3Q9BYJ1 711 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ASPSCR1Q9BZE9 553 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 SERHL2Q9H4I8 314 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 IFT22Q9H7X7 185 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 RC3H2Q9HBD1 1191 aaKnown RBP4.8□□□□□ -1.64
PRKD3-210ENST00000494667 GKN1Q9NS71 199 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ADPRHL2Q9NX46 363 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 ADA2Q9NZK5 511 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 RAPGEFL1Q9UHV5 662 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PCDHGA10Q9Y5H3 936 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PEX16Q9Y5Y5 336 aa4.8□□□□□ -1.64
PRKD3-210ENST00000494667 PDZK1P1A8MUH7 402 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PLK4O00444 970 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 DPYSL4O14531 572 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 MRASO14807 208 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 FZD6O60353 706 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SOAT2O75908 522 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 LDLRP01130 860 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 PIGRP01833 764 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 APOA1P02647 267 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 GNA15P30679 374 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 HIBADHP31937 336 aaKnown RBP4.79□□□□□ -1.64
PRKD3-210ENST00000494667 GZMKP49863 264 aa4.79□□□□□ -1.64
PRKD3-210ENST00000494667 SLC35A2P78381 396 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms