RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CTNNA2P26232 953 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 TRIM23P36406 574 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 HK3P52790 923 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 ACOX1Q15067 660 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 ALG11Q2TAA5 492 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 PRRT3Q5FWE3 981 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 C6orf132Q5T0Z8 1188 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 USP45Q70EL2 814 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 CCDC13Q8IYE1 715 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 SDR16C5Q8N3Y7 309 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 PDCD7Q8N8D1 485 aaKnown RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 LMX1AQ8TE12 382 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 PIH1D2Q8WWB5 315 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 NUS1Q96E22 293 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 DTD2Q96FN9 168 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 SCRN2Q96FV2 425 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 OLFM3Q96PB7 478 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 IL12RB2Q99665 862 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 BOCQ9BWV1 1114 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 CCDC86Q9H6F5 360 aaKnown RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 RBM22Q9NW64 420 aaKnown RBP eCLIP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 DDX56Q9NY93 547 aaKnown RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 OR1A2Q9Y585 309 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 RAI2Q9Y5P3 530 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 ALG6Q9Y672 507 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 COL27A1Q8IZC6 1860 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 NPIPB15A6NHN6 443 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 APOL1O14791 398 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 ATP8B1O43520 1251 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 PSTPIP1O43586 416 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 SPOPO43791 374 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 ERLIN1O75477 346 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 GCATO75600 419 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 HLA-DQB2P05538 268 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 RHOXF2BP0C7M4 288 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 KRT10P13645 584 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 ZFXP17010 805 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 CA4P22748 312 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 KELP23276 732 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 IFI35P80217 286 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 INSM1Q01101 510 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 DSC2Q02487 901 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 ELOCQ15369 112 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 DEFB133Q30KQ1 61 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 MARCH9Q86YJ5 346 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 NDUFAF2Q8N183 169 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 CBARPQ8N350 705 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 ARRDC2Q8TBH0 407 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 FUBP1Q96AE4 644 aaKnown RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 NXPE2Q96DL1 559 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 MS4A14Q96JA4 679 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 RHOXF2Q9BQY4 288 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 TDRD1Q9BXT4 1180 aaKnown RBP13.2□□□□□ -0.3
ERCC3-209ENST00000494464 CLPBQ9H078 707 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 WDR26Q9H7D7 661 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 KLQ9UEF7 1012 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 DNPEPQ9ULA0 475 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 DGKBQ9Y6T7 804 aa13.2□□□□□ -0.3
ERCC3-209ENST00000494464 DMXL2Q8TDJ6 3036 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ZZEF1O43149 2961 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 A0A0J9YYE9 177 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 CCDC66A2RUB6 948 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 TRABD2BA6NFA1 517 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 SRRM3A6NNA2 597 aaPredicted RBP13.19□□□□□ -0.3
ERCC3-209ENST00000494464 A8MX80 341 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 CCDC188H7C350 402 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 TNFRSF10CO14798 259 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 CEP104O60308 925 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 KRT37O76014 449 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ZRANB2O95218 330 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERCC3-209ENST00000494464 TRBC1P01850 177 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ANXA6P08133 673 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 PDHA1P08559 390 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ALPIP09923 528 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 JUPP14923 745 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 TSHRP16473 764 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ZNF30P17039 623 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 COMTP21964 271 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 TEAD1P28347 426 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 CTNNA1P35221 906 aaKnown RBP13.19□□□□□ -0.3
ERCC3-209ENST00000494464 CLDN6P56747 220 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 SRP54P61011 504 aaKnown RBP13.19□□□□□ -0.3
ERCC3-209ENST00000494464 RPL26P61254 145 aaKnown RBP13.19□□□□□ -0.3
ERCC3-209ENST00000494464 VSNL1P62760 191 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ITKQ08881 620 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ARHGEF7Q14155 803 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 IHHQ14623 411 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 TAZQ16635 292 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 PNCKQ6P2M8 343 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 LVRNQ6Q4G3 990 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 ENPP7Q6UWV6 458 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 HID1Q8IV36 788 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 DCBLD1Q8N8Z6 715 aa13.19□□□□□ -0.3
ERCC3-209ENST00000494464 CCNYQ8ND76 341 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms