RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 CNGA3Q16281 694 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 SLC45A4Q5BKX6 768 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 CFAP58Q5T655 872 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 ARMC12Q5T9G4 340 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 ERAP2Q6P179 960 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 Q6ZSR6 202 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 BZW1Q7L1Q6 419 aaKnown RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 ERMP1Q7Z2K6 904 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 LYSMD3Q7Z3D4 306 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 DGLUCYQ7Z3D6 616 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 TRIM46Q7Z4K8 759 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 ACTL9Q8TC94 416 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 TFB1MQ8WVM0 346 aaKnown RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 UBE2Q2Q8WVN8 375 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 SKA1Q96BD8 255 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 SCRN2Q96FV2 425 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 KLHDC7BQ96G42 594 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 TEKT5Q96M29 485 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 SMIM14Q96QK8 99 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 LYSMD1Q96S90 227 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 CEP41Q9BYV8 373 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 KCNF1Q9H3M0 494 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 CAAP1Q9H8G2 361 aa8.79□□□□□ -1
ITGB1-217ENST00000494395 PNMA8BQ9ULN7 279 aaPredicted RBP8.79□□□□□ -1
ITGB1-217ENST00000494395 A0A0J9YYE9 177 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 A0A0U1RQS6 177 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 SPTY2D1-AS1A0A0U1RR47 76 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 TCRBV7S2A1N4TA0A589 114 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ANKRD33BA6NCL7 494 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 CAPN8A6NHC0 703 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 TTLL8A6PVC2 850 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PSMD11O00231 422 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 TOR1BO14657 336 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 FPGTO14772 594 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 FLRT2O43155 660 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 MTSS1O43312 755 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 SH3BP5O60239 455 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 RECQL5O94762 991 aaPredicted RBP8.78□□□□□ -1
ITGB1-217ENST00000494395 TRBC1P01850 177 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ALPIP09923 528 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ELFN1P0C7U0 828 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 CEACAM1P13688 526 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 RBL1P28749 1068 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 EPHA8P29322 1005 aaPredicted RBP8.78□□□□□ -1
ITGB1-217ENST00000494395 VIPR1P32241 457 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 CD86P42081 329 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 RABIFP47224 123 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 RPL26P61254 145 aaKnown RBP8.78□□□□□ -1
ITGB1-217ENST00000494395 FAM193AP78312 1265 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ITKQ08881 620 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 FZD2Q14332 565 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 LRRC14Q15048 493 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 IRF4Q15306 451 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 CDKN3Q16667 212 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PPM1JQ5JR12 505 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PRAMEF14Q5SWL7 426 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 MEI1Q5TIA1 1274 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ALKBH2Q6NS38 261 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 CRTC1Q6UUV9 634 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PTAR1Q7Z6K3 402 aaPredicted RBP8.78□□□□□ -1
ITGB1-217ENST00000494395 TSPAN33Q86UF1 283 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ZC3H18Q86VM9 953 aaKnown RBP8.78□□□□□ -1
ITGB1-217ENST00000494395 DCP2Q8IU60 420 aaKnown RBP8.78□□□□□ -1
ITGB1-217ENST00000494395 NAXDQ8IW45 347 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ZNF567Q8N184 647 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PELI3Q8N2H9 469 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 OXR1Q8N573 874 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.78□□□□□ -1
ITGB1-217ENST00000494395 UBL4BQ8N7F7 174 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PLA2G15Q8NCC3 412 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 DEFB124Q8NES8 71 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 SPATA22Q8NHS9 363 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 SAP25Q8TEE9 199 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PDCD6IPQ8WUM4 868 aaKnown RBP8.78□□□□□ -1
ITGB1-217ENST00000494395 HTR3CQ8WXA8 447 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 IFT43Q96FT9 208 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 CAMK1GQ96NX5 476 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 AGAP3Q96P47 875 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 RBM15Q96T37 977 aaKnown RBP eCLIP8.78□□□□□ -1
ITGB1-217ENST00000494395 GORASP1Q9BQQ3 440 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 SLC25A51Q9H1U9 297 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 USP29Q9HBJ7 922 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 GLOD4Q9HC38 313 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PCDH9Q9HC56 1237 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 LZTFL1Q9NQ48 299 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 HAUS2Q9NVX0 235 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 ZDHHC3Q9NYG2 299 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PCOLCE2Q9UKZ9 415 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 RPL26L1Q9UNX3 145 aaKnown RBP8.78□□□□□ -1
ITGB1-217ENST00000494395 CHKBQ9Y259 395 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 BTBD3Q9Y2F9 522 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 PPP2R2CQ9Y2T4 447 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 TTLL3Q9Y4R7 772 aa8.78□□□□□ -1
ITGB1-217ENST00000494395 MED19A0JLT2 244 aaPredicted RBP8.77□□□□□ -1.01
ITGB1-217ENST00000494395 FIGNL2A6NMB9 653 aa8.77□□□□□ -1.01
ITGB1-217ENST00000494395 A8MX80 341 aa8.77□□□□□ -1.01
ITGB1-217ENST00000494395 YKT6O15498 198 aa8.77□□□□□ -1.01
ITGB1-217ENST00000494395 NEBLO76041 1014 aa8.77□□□□□ -1.01
ITGB1-217ENST00000494395 MT-CYBP00156 380 aaPredicted RBP8.77□□□□□ -1.01
ITGB1-217ENST00000494395 C1SP09871 688 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms