RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	ZNF197	O14709	1029 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	PDPK1	O15530	556 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	CYP26A1	O43174	497 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	MTSS1	O43312	755 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	PLOD3	O60568	738 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	MT-ND3	P03897	115 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	KRT16	P08779	473 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	RARA	P10276	462 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	STMN1	P16949	149 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	HMGA1	P17096	107 aa	Known RBP	11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	PSMA2	P25787	234 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	TNFRSF8	P28908	595 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	TRHR	P34981	398 aa	Predicted RBP	11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	UBE2I	P63279	158 aa	Known RBP	11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	PRKCQ	Q04759	706 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	TEAD2	Q15562	447 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	SGCA	Q16586	387 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	PRSS36	Q5K4E3	855 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	STXBP5	Q5T5C0	1151 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	C11orf88	Q6PI97	169 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	MACC1	Q6ZN28	852 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	GAREM2	Q75VX8	874 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	KRT74	Q7RTS7	529 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	COMTD1	Q86VU5	262 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	PIK3C3	Q8NEB9	887 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	ZMIZ2	Q8NF64	920 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	SHKBP1	Q8TBC3	707 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	ADAM32	Q8TC27	787 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	TFAP2B	Q92481	460 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	RAB7B	Q96AH8	199 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	NMD3	Q96D46	503 aa	Known RBP	11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	MCRS1	Q96EZ8	462 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	ERGIC2	Q96RQ1	377 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	PPAN	Q9NQ55	473 aa	Known RBP	11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	UXT	Q9UBK9	157 aa	Predicted RBP	11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	INVS	Q9Y283	1065 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	DOCK8	Q8NF50	2099 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919		A0A0A6YYJ9	748 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	OR6C74	A6NCV1	312 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	SLCO1B7	G3V0H7	640 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	NOL4	O94818	638 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	KRT1	P04264	644 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	GLA	P06280	429 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	STX2	P32856	288 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	BCAT1	P54687	386 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	EPHA5	P54756	1037 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	STX1B	P61266	288 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	KCTD21	Q4G0X4	260 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	TDRD12	Q587J7	1177 aa	Known RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	ARHGAP17	Q68EM7	881 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	DPY19L2P1	Q6NXN4	242 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	ARHGAP11A	Q6P4F7	1023 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	GPRIN1	Q7Z2K8	1008 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	PSD4	Q8NDX1	1056 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	SCAMP5	Q8TAC9	235 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	UBA3	Q8TBC4	463 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	NAPG	Q99747	312 aa	Predicted RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	LRRC3	Q9BY71	257 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	DUSP16	Q9BY84	665 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	SIAE	Q9HAT2	523 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	KCNK13	Q9HB14	408 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	IL21	Q9HBE4	155 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	IFNK	Q9P0W0	207 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	CDH7	Q9ULB5	785 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	VWA7	Q9Y334	891 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	GREB1	Q4ZG55	1949 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	OBSL1	O75147	1896 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	ILVBL	A1L0T0	632 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	CRTAP	O75718	401 aa	Predicted RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	BST2	Q10589	180 aa	Known RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	STX3	Q13277	289 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	ARHGAP15	Q53QZ3	475 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	GPR158	Q5T848	1215 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	INTS11	Q5TA45	600 aa	Known RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	AAGAB	Q6PD74	315 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	C1orf122	Q6ZSJ8	110 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	RALGPS2	Q86X27	583 aa	Predicted RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	GJD3	Q8N144	294 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	AGGF1	Q8N302	714 aa	eCLIP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	ANKRD52	Q8NB46	1076 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	MINDY2	Q8NBR6	621 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	IFI44	Q8TCB0	444 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	UTP15	Q8TED0	518 aa	Known RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	FBXO32	Q969P5	355 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	DNAJC1	Q96KC8	554 aa	Known RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	ZSWIM1	Q9BR11	485 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	GPR88	Q9GZN0	384 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	USP29	Q9HBJ7	922 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	CSNK1G1	Q9HCP0	422 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	GLRX2	Q9NS18	164 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	TXLNG	Q9NUQ3	528 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	CNTN6	Q9UQ52	1028 aa		11.62	□□□□□ -0.55
BRCA1-222	ENST00000493919	LOC730098	B7Z3J9	87 aa		11.61	□□□□□ -0.55
BRCA1-222	ENST00000493919		H3BRJ5	948 aa		11.61	□□□□□ -0.55
BRCA1-222	ENST00000493919	RASGRF2	O14827	1237 aa		11.61	□□□□□ -0.55
BRCA1-222	ENST00000493919	MOSPD3	O75425	235 aa		11.61	□□□□□ -0.55
BRCA1-222	ENST00000493919	FGF19	O95750	216 aa		11.61	□□□□□ -0.55

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