RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 KIAA1958Q8N8K9 716 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 TDRD5Q8NAT2 981 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 NOA1Q8NC60 698 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 MNS1Q8NEH6 495 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 BHLHE22Q8NFJ8 381 aaPredicted RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 ACTL9Q8TC94 416 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 MAIP1Q8WWC4 291 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 ATXN2LQ8WWM7 1075 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 USP7Q93009 1102 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 MAGOHBQ96A72 148 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 CELF6Q96J87 481 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 PRICKLE1Q96MT3 831 aaPredicted RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 NECTIN4Q96NY8 510 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 DDX50Q9BQ39 737 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 RPP25Q9BUL9 199 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 ZYG11BQ9C0D3 744 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 C10orf88Q9H8K7 445 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 PRDM16Q9HAZ2 1276 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 CD320Q9NPF0 282 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF212Q9UDV6 495 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 KCTD3Q9Y597 815 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 WNT6Q9Y6F9 365 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 PMF1-BGLAPU3KQ54 211 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 DOCK4Q8N1I0 1966 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 HELZP42694 1942 aaKnown RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CTAGE15A4D2H0 777 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 NPIPB6E9PJ23 425 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 H7C0C1 242 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 APOC4-APOC2K7ER74 178 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 LIASO43766 372 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 MFSD11O43934 449 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 SLU7O95391 586 aaKnown RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 APOC2P02655 101 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CTAGE8P0CG41 777 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 ARSAP15289 507 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 TGM2P21980 687 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CHKAP35790 457 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 COILP38432 576 aaPredicted RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 ATP5OP48047 213 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 NR2C2P49116 596 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 ITGA1P56199 1179 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 EIF3EP60228 445 aaKnown RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 NFKB2Q00653 900 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 PFKPQ01813 784 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 DBPQ10586 325 aaPredicted RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 SMAD4Q13485 552 aaKnown RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 DHCR24Q15392 516 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CCNG2Q16589 344 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CYP1B1Q16678 543 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 MPPE1Q53F39 396 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 RABGAP1LQ5R372 815 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 LY6G5CQ5SRR4 150 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 TRIM68Q6AZZ1 485 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 RHBDF2Q6PJF5 856 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 TMCO3Q6UWJ1 677 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 VITQ6UXI7 678 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 TPGS1Q6ZTW0 290 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CTAGE6Q86UF2 777 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 PROSER1Q86XN7 944 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 MFSD6LQ8IWD5 586 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 ARHGAP12Q8IWW6 846 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CTAGE4Q8IX94 777 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 UMODL1-AS1Q8N2C9 162 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CPXM2Q8N436 756 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CARNMT1Q8N4J0 409 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 MMGT1Q8N4V1 131 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 NPWQ8N729 165 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 RTL3Q8N8U3 475 aaKnown RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 OR52K2Q8NGK3 314 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 SLC35B2Q8TB61 432 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 BPIFB1Q8TDL5 484 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 DDI1Q8WTU0 396 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 P3H4Q92791 437 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 FGF14Q92915 247 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 ZBTB8AQ96BR9 441 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 ZFYVE19Q96K21 471 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 PWWP2AQ96N64 755 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 KRT12Q99456 494 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 KXD1Q9BQD3 176 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 SLC39A8Q9C0K1 460 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 DDX47Q9H0S4 455 aaKnown RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 LRRC19Q9H756 370 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CATSPERBQ9H7T0 1116 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 KIF9Q9HAQ2 790 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 ZFP14Q9HCL3 533 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 TMEM248Q9NWD8 314 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 DUS2Q9NX74 493 aaKnown RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 PLK2Q9NYY3 685 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 TBC1D14Q9P2M4 693 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 DNPEPQ9ULA0 475 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 CLEC4EQ9ULY5 219 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 WASF3Q9UPY6 502 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 DRG1Q9Y295 367 aaKnown RBP6.68□□□□□ -1.34
TRA2B-216ENST00000493864 F5P12259 2224 aa6.68□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.67□□□□□ -1.34
TRA2B-216ENST00000493864 GOLGA6L10A0A0M3HER8 536 aa6.67□□□□□ -1.34
TRA2B-216ENST00000493864 C2CD4DB7Z1M9 353 aa6.67□□□□□ -1.34
TRA2B-216ENST00000493864 RASA4BC9J798 803 aa6.67□□□□□ -1.34
TRA2B-216ENST00000493864 CCDC188H7C350 402 aa6.67□□□□□ -1.34
TRA2B-216ENST00000493864 DFFAO00273 331 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms