RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 RAET1GQ6H3X3 334 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 DENND5AQ6IQ26 1287 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 HIBCHQ6NVY1 386 aaPredicted RBP7.59□□□□□ -1.19
VEGFA-214ENST00000493786 CEP128Q6ZU80 1094 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 Q6ZVL8 140 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 ZNF765Q7L2R6 523 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 HSD11B1LQ7Z5J1 315 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 TMC3Q7Z5M5 1100 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 PTAR1Q7Z6K3 402 aaPredicted RBP7.59□□□□□ -1.19
VEGFA-214ENST00000493786 SLC41A1Q8IVJ1 513 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 IFT20Q8IY31 132 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 CEP76Q8TAP6 659 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 FAM174AQ8TBP5 190 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 PTCD2Q8WV60 388 aaKnown RBP7.59□□□□□ -1.19
VEGFA-214ENST00000493786 PIGKQ92643 395 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 AP2M1Q96CW1 435 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 DTD2Q96FN9 168 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 LOXL4Q96JB6 756 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 COQ10AQ96MF6 247 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 LENG8Q96PV6 779 aaPredicted RBP7.59□□□□□ -1.19
VEGFA-214ENST00000493786 SMIM14Q96QK8 99 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 RANBP9Q96S59 729 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 MYOCQ99972 504 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 RHOXF2Q9BQY4 288 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 SPATA16Q9BXB7 569 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 FAM83DQ9H4H8 585 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 EPB41L5Q9HCM4 733 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 BPIFA1Q9NP55 256 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 MTRF1LQ9UGC7 380 aaKnown RBP7.59□□□□□ -1.19
VEGFA-214ENST00000493786 CD84Q9UIB8 345 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 APPL1Q9UKG1 709 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 ARL5AQ9Y689 179 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 MAD1L1Q9Y6D9 718 aa7.59□□□□□ -1.19
VEGFA-214ENST00000493786 ZNF318Q5VUA4 2279 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 ATXN2Q99700 1313 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 GLYATL1P3A0A0U1RQE8 302 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 A0A0U1RQS6 177 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 A0A1B0GTW7 788 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 ESYT3A0FGR9 886 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 MAGEB16A2A368 324 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 CCDC78A2IDD5 438 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 AURKAO14965 403 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 BCAT2O15382 392 aaPredicted RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 BUD23O43709 281 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 EPN2O95208 641 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 LMNAP02545 664 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 CFIP05156 583 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TSHRP16473 764 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 ITPKAP23677 461 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 IVDP26440 423 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 MAOBP27338 520 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 GPR1P46091 355 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 AFF3P51826 1226 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 THOP1P52888 689 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 DRG2P55039 364 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 PLTPP55058 493 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 RACK1P63244 317 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 PRAMEP78395 509 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TMPRSS15P98073 1019 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 MTM1Q13496 603 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 CUL1Q13616 776 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 ITGA9Q13797 1035 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 PTK2BQ14289 1009 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 AGERQ15109 404 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 IRF4Q15306 451 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 CDKN3Q16667 212 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 DUOXA1Q1HG43 343 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 BBS9Q3SYG4 887 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 CCDC38Q502W7 563 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TSTD2Q5T7W7 516 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 ESRP1Q6NXG1 681 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 CENPUQ71F23 418 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TECPR1Q7Z6L1 1165 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 SYT12Q8IV01 421 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 CCNJLQ8IV13 435 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TTC30BQ8N4P2 665 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 ZCCHC9Q8N567 271 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TRAM1L1Q8N609 369 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 OTUD6BQ8N6M0 293 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 GPR161Q8N6U8 529 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TP53I13Q8NBR0 393 aaPredicted RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 OR4K2Q8NGD2 314 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 GABPB2Q8TAK5 448 aaPredicted RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 STYXQ8WUJ0 223 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 IFT81Q8WYA0 676 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 DNASE2BQ8WZ79 361 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.58□□□□□ -1.27e-6■■■■■ 27.5
VEGFA-214ENST00000493786 LRRC39Q96DD0 335 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 STAMBPL1Q96FJ0 436 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 PLEKHG4BQ96PX9 1271 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 C19orf43Q9BQ61 176 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 HINFPQ9BQA5 517 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 NAT9Q9BTE0 207 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 ZSCAN5AQ9BUG6 496 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 RIOK2Q9BVS4 552 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 FOXP3Q9BZS1 431 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 TSPYL1Q9H0U9 437 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 WDR26Q9H7D7 661 aa7.58□□□□□ -1.2
VEGFA-214ENST00000493786 MRM3Q9HC36 420 aaKnown RBP7.58□□□□□ -1.2
VEGFA-214ENST00000493786 FZD3Q9NPG1 666 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms