RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PCDHGC4Q9Y5F7 938 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 PCDHGA3Q9Y5H0 932 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 ST14Q9Y5Y6 855 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 B3GALT1Q9Y5Z6 326 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 IGHV1OR21-1A0A087WYE8 117 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.31□□□□□ -0.44
SAMM50-205ENST00000493621 EIF3CLB5ME19 914 aaKnown RBP12.31□□□□□ -0.44
SAMM50-205ENST00000493621 PPM1DO15297 605 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 HEXIM1O94992 359 aaKnown RBP12.31□□□□□ -0.44
SAMM50-205ENST00000493621 CPP00450 1065 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 CSF2RBP32927 897 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 UGT1A3P35503 534 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 ADCY8P40145 1251 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 ETV3P41162 512 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 COPB1P53618 953 aaKnown RBP12.31□□□□□ -0.44
SAMM50-205ENST00000493621 POLE2P56282 527 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 CDK3Q00526 305 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 CTBSQ01459 385 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 KCNAB2Q13303 367 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 TRA2AQ13595 282 aaKnown RBP eCLIP12.31□□□□□ -0.44
SAMM50-205ENST00000493621 ZNF235Q14590 738 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 SKIDA1Q1XH10 827 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 PPP6R3Q5H9R7 873 aaPredicted RBP12.31□□□□□ -0.44
SAMM50-205ENST00000493621 TMCO4Q5TGY1 634 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 RAET1GQ6H3X3 334 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 DOK6Q6PKX4 331 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 HSD11B1LQ7Z5J1 315 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 TP53INP2Q8IXH6 220 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 CACNA2D3Q8IZS8 1091 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 NAGSQ8N159 534 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 ARFGAP1Q8N6T3 406 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 AGBL5Q8NDL9 886 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 CCDC112Q8NEF3 446 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 OR4D9Q8NGE8 314 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 ZNF564Q8TBZ8 553 aaPredicted RBP12.31□□□□□ -0.44
SAMM50-205ENST00000493621 DTD2Q96FN9 168 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 PSKH2Q96QS6 385 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 EIF3CQ99613 913 aaKnown RBP12.31□□□□□ -0.44
SAMM50-205ENST00000493621 ZMYND15Q9H091 742 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 CDH19Q9H159 772 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 KCTD5Q9NXV2 234 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 SLC39A1Q9NY26 324 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 KCNK4Q9NYG8 393 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 TAS2R14Q9NYV8 317 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 TMEM9Q9P0T7 183 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 PLEKHM1Q9Y4G2 1056 aa12.31□□□□□ -0.44
SAMM50-205ENST00000493621 EFCAB7A8K855 629 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-205ENST00000493621 HTRA2O43464 458 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-205ENST00000493621 RAD1O60671 282 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 SOCS5O75159 536 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 IVLP07476 585 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 THRAP10827 490 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 LHCGRP22888 699 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 ACTR1BP42025 376 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 PPM1FP49593 454 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-205ENST00000493621 ACTR1AP61163 376 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 MAMLD1Q13495 774 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 PEX6Q13608 980 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 PTPRRQ15256 657 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 Q6ZVL8 140 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 FAM129CQ86XR2 697 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 NRSN1Q8IZ57 195 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 ZNF599Q96NL3 588 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 DDA1Q9BW61 102 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 EPN3Q9H201 632 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 FANCLQ9NW38 375 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 OCIAD1Q9NX40 245 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 SLC17A4Q9Y2C5 497 aa12.3□□□□□ -0.44
SAMM50-205ENST00000493621 TRBV23OR9-2A0A075B6M9 112 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 A0A1W2PQ67 120 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 NPIPB15A6NHN6 443 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-205ENST00000493621 ZNF891A8MT65 544 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-205ENST00000493621 TMCO5BA8MYB1 307 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 PRPSAP2O60256 369 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 RNF8O76064 485 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 CYP2A6P11509 494 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-205ENST00000493621 NFKBIAP25963 317 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 GPR1P46091 355 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 CCR10P46092 362 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 UBXN1Q04323 297 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 TRAF2Q12933 501 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 SQSTM1Q13501 440 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 DCAF12Q5T6F0 453 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 ANKS6Q68DC2 871 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 CYP4V2Q6ZWL3 525 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-205ENST00000493621 TSPAN33Q86UF1 283 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 ZNF761Q86XN6 746 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-205ENST00000493621 CBARPQ8N350 705 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-205ENST00000493621 PGBD5Q8N414 524 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 AHCYL2Q96HN2 611 aaKnown RBP12.29□□□□□ -0.44
SAMM50-205ENST00000493621 OR2M4Q96R27 311 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 NUDCD1Q96RS6 583 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 DPYSL5Q9BPU6 564 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 ASPSCR1Q9BZE9 553 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 NOD2Q9HC29 1040 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 PARVAQ9NVD7 372 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 CWC15Q9P013 229 aaKnown RBP12.29□□□□□ -0.44
SAMM50-205ENST00000493621 ANKMY1Q9P2S6 941 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms