RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PDHXO00330 501 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 ASNA1O43681 348 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 FCGR2AP12318 317 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 GSTM2P28161 218 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 TYK2P29597 1187 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 FKBP1AP62942 108 aaKnown RBP3.34□□□□□ -1.87
PTCD3-218ENST00000493430 PRKCZQ05513 592 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 CDK18Q07002 472 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 G3BP1Q13283 466 aaKnown RBP eCLIP3.34□□□□□ -1.87
PTCD3-218ENST00000493430 ALKBH1Q13686 389 aaKnown RBP3.34□□□□□ -1.87
PTCD3-218ENST00000493430 MVPQ14764 893 aaKnown RBP3.34□□□□□ -1.87
PTCD3-218ENST00000493430 CCL14Q16627 93 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 BTBD16Q32M84 506 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 EFHC1Q5JVL4 640 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 GORABQ5T7V8 394 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 ANO1Q5XXA6 986 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 ATG9BQ674R7 924 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 MTFR2Q6P444 385 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 KIAA1324Q6UXG2 1013 aaKnown RBP3.34□□□□□ -1.87
PTCD3-218ENST00000493430 TEX45Q8NA69 505 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 LILRB1Q8NHL6 650 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-218ENST00000493430 ACER1Q8TDN7 264 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 HDAC7Q8WUI4 952 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 FAR1Q8WVX9 515 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 FAM151AQ8WW52 585 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 FRG2BQ96QU4 278 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 PAGR1Q9BTK6 254 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 IFT27Q9BW83 186 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 BOLA2Q9H3K6 86 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 TMOD2Q9NZR1 351 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 AGO1Q9UL18 857 aaKnown RBP3.34□□□□□ -1.87
PTCD3-218ENST00000493430 ZHX2Q9Y6X8 837 aa3.34□□□□□ -1.87
PTCD3-218ENST00000493430 MYH11P35749 1972 aa3.34□□□□□ -1.88
PTCD3-218ENST00000493430 CKAP5Q14008 2032 aa3.34□□□□□ -1.88
PTCD3-218ENST00000493430 ANO9A1A5B4 782 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 FAM90A18PA6NE21 464 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 FAM90A16PA6NEW6 464 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 FAM90A9PA6NNJ1 464 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 FAM90A5PA8MXJ8 464 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 BMPR1BO00238 502 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 MBD4O95243 580 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SP1P08047 785 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 MMP3P08254 477 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 FAM90A15PP0C7V4 464 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 FAM90A14PP0C7W9 464 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 C21orf33P30042 268 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-218ENST00000493430 RFC1P35251 1148 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-218ENST00000493430 CDK7P50613 346 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 CLCNKBP51801 687 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SNAP25P60880 206 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 FKBP1BP68106 108 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 BNC1Q01954 994 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SPP2Q13103 211 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 PPIL2Q13356 520 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SF3B4Q15427 424 aaKnown RBP eCLIP3.33□□□□□ -1.882e-6■■□□□ 12.6
PTCD3-218ENST00000493430 MRGPRG-AS1Q2M3A8 158 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SYTL3Q4VX76 610 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 ATPAF1Q5TC12 328 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-218ENST00000493430 TMEM268Q5VZI3 342 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 NAA16Q6N069 864 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-218ENST00000493430 FBXO46Q6PJ61 603 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SERPINA11Q86U17 422 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SYTL1Q8IYJ3 562 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SCYL3Q8IZE3 742 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 VPS52Q8N1B4 723 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 ANKRD13CQ8N6S4 541 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 TBC1D22AQ8WUA7 517 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 KIAA1191Q96A73 305 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 NODALQ96S42 347 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 PKP4Q99569 1192 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 PORCNQ9H237 461 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 METTL14Q9HCE5 456 aaKnown RBP3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SAGE1Q9NXZ1 904 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 DONSONQ9NYP3 566 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 KLHL42Q9P2K6 505 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 LZTS1Q9Y250 596 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 ZNF532Q9HCE3 1301 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SALL1Q9NSC2 1324 aa3.33□□□□□ -1.88
PTCD3-218ENST00000493430 COL2A1P02458 1487 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-218ENST00000493430 SCN10AQ9Y5Y9 1956 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 GPR75-ASB3A0A0A6YYF3 556 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 A0A1W2PRG0 241 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 KIF1CO43896 1103 aaKnown RBP3.32□□□□□ -1.88
PTCD3-218ENST00000493430 PRDM1O75626 825 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 CNMDO75829 334 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 GH2P01242 217 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 AKR1B1P15121 316 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 CCND3P30281 292 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-218ENST00000493430 SHMT1P34896 483 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 PSMC4P43686 418 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 AK2P54819 239 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 SP3Q02447 781 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 ACSM2AQ08AH3 577 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 SREBF2Q12772 1141 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 TNFAIP1Q13829 316 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 HLTFQ14527 1009 aaKnown RBP eCLIP3.32□□□□□ -1.88
PTCD3-218ENST00000493430 CCDC181Q5TID7 509 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 RETSATQ6NUM9 610 aa3.32□□□□□ -1.88
PTCD3-218ENST00000493430 RNF144BQ7Z419 303 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms