RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 NCAPHQ15003 741 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 ACOX1Q15067 660 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 CNGA3Q16281 694 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 CA9Q16790 459 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 SCYL2Q6P3W7 929 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 ZNF761Q86XN6 746 aaPredicted RBP13.21□□□□□ -0.29
USF1-206ENST00000491629 ZNF677Q86XU0 584 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 FAM26EQ8N5C1 309 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 CTRCQ99895 268 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 GSDMCQ9BYG8 508 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 APMAPQ9HDC9 416 aa13.21□□□□□ -0.29
USF1-206ENST00000491629 A0A0U1RQS6 177 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 MTSS1O43312 755 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 EML2O95834 649 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 SOD1P00441 154 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 LHCGRP22888 699 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 ETV3P41162 512 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 CD97P48960 835 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 CDK3Q00526 305 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 BCL2L1Q07817 233 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 ILF3Q12906 894 aaKnown RBP eCLIP13.2□□□□□ -0.3
USF1-206ENST00000491629 TSR1Q2NL82 804 aaKnown RBP13.2□□□□□ -0.3
USF1-206ENST00000491629 PPP1R15BQ5SWA1 713 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 CFAP58Q5T655 872 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 TMEM71Q6P5X7 295 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 RFLNAQ6ZTI6 216 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 MON1BQ7L1V2 547 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 ARHGAP22Q7Z5H3 698 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 HSD11B1LQ7Z5J1 315 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 NUS1Q96E22 293 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 SCARF2Q96GP6 870 aaPredicted RBP13.2□□□□□ -0.3
USF1-206ENST00000491629 CATSPER2Q96P56 530 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 ADAM22Q9P0K1 906 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 SLC17A4Q9Y2C5 497 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 PCYT1BQ9Y5K3 369 aaPredicted RBP13.2□□□□□ -0.3
USF1-206ENST00000491629 MRPS18BQ9Y676 258 aaKnown RBP13.2□□□□□ -0.3
USF1-206ENST00000491629 CSMD1Q96PZ7 3565 aa13.2□□□□□ -0.3
USF1-206ENST00000491629 FGF10O15520 208 aaPredicted RBP13.19□□□□□ -0.3
USF1-206ENST00000491629 HTRA2O43464 458 aaPredicted RBP13.19□□□□□ -0.3
USF1-206ENST00000491629 PALMO75781 387 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 F8A1P23610 371 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 CSTF2P33240 577 aaKnown RBP eCLIP13.19□□□□□ -0.3
USF1-206ENST00000491629 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
USF1-206ENST00000491629 NDST2P52849 883 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 NSUN2Q08J23 767 aaKnown RBP eCLIP13.19□□□□□ -0.3
USF1-206ENST00000491629 CLEC16AQ2KHT3 1053 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 DEFB109BQ30KR1 87 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 C4orf17Q53FE4 359 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 DCAF12Q5T6F0 453 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 FAM129CQ86XR2 697 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 PHF13Q86YI8 300 aaPredicted RBP13.19□□□□□ -0.3
USF1-206ENST00000491629 ARFGAP1Q8N6T3 406 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 NPWQ8N729 165 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 DTD2Q96FN9 168 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 ASPSCR1Q9BZE9 553 aa13.19□□□□□ -0.3
USF1-206ENST00000491629 PHPT1Q9NRX4 125 aaPredicted RBP13.19□□□□□ -0.3
USF1-206ENST00000491629 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
USF1-206ENST00000491629 TRBV23OR9-2A0A075B6M9 112 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 PRR19A6NJB7 356 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 PDE2AO00408 941 aaPredicted RBP13.18□□□□□ -0.3
USF1-206ENST00000491629 HEXIM1O94992 359 aaKnown RBP13.18□□□□□ -0.3
USF1-206ENST00000491629 DLGAP3O95886 979 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 IVLP07476 585 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 FURINP09958 794 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 SOX5P35711 763 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 SCNN1BP51168 640 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 MLLT10P55197 1068 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 MC2RQ01718 297 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 DPCR1Q3MIW9 517 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.18□□□□□ -0.3
USF1-206ENST00000491629 DENND2CQ68D51 928 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 Q6ZVL8 140 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 CYP4V2Q6ZWL3 525 aaPredicted RBP13.18□□□□□ -0.3
USF1-206ENST00000491629 TSPAN33Q86UF1 283 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 NRSN1Q8IZ57 195 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 PGBD5Q8N414 524 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
USF1-206ENST00000491629 FNIP1Q8TF40 1166 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 RNF31Q96EP0 1072 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 MCEEQ96PE7 176 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 SMIM14Q96QK8 99 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 PEBP4Q96S96 227 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 SELENOOQ9BVL4 669 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 VPS16Q9H269 839 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 GPN2Q9H9Y4 310 aaPredicted RBP13.18□□□□□ -0.3
USF1-206ENST00000491629 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 TP53TG5Q9Y2B4 290 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 TMEM184BQ9Y519 407 aaPredicted RBP13.18□□□□□ -0.3
USF1-206ENST00000491629 PCDHGC4Q9Y5F7 938 aa13.18□□□□□ -0.3
USF1-206ENST00000491629 NPIPB15A6NHN6 443 aaPredicted RBP13.17□□□□□ -0.3
USF1-206ENST00000491629 ARHGAP42A6NI28 874 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 A8MU76 341 aa13.17□□□□□ -0.3
USF1-206ENST00000491629 CAPN5O15484 640 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms