RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ARNTP27540 789 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 PXNP49023 591 aaPredicted RBP21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 ARSDP51689 593 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 STC1P52823 247 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 LONRF1Q17RB8 773 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 LIPIQ6XZB0 460 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 MAML2Q8IZL2 1156 aaPredicted RBP21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 PGBD3Q8N328 593 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 FBF1Q8TES7 1133 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 CERS2Q96G23 380 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 C19orf43Q9BQ61 176 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 WRAP53Q9BUR4 548 aaKnown RBP21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 CD93Q9NPY3 652 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 ZNF318Q5VUA4 2279 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 TRPM6Q9BX84 2022 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 KMT2EQ8IZD2 1858 aa21.72■■□□□ 1.07
VCPKMT-204ENST00000491402 A0A087WUV0 522 aaPredicted RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 K7ESF4 209 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 SLC7A4O43246 635 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 RPP40O75818 363 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 VAPBO95292 243 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 STX2P32856 288 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 HADHAP40939 763 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 LIG3P49916 1009 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 TPMTP51580 245 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 SFSWAPQ12872 951 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 FRG1Q14331 258 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 CASP8Q14790 479 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 SMAD1Q15797 465 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 HDAC10Q969S8 669 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 TBATAQ96M53 351 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 FUT8Q9BYC5 575 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 NCKAP1Q9Y2A7 1128 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 PLRG1O43660 514 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 ARCN1P48444 511 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 ADPRHP54922 357 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 PRAMEP78395 509 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 CSTF1Q05048 431 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 TMEM52BQ4KMG9 183 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 CYS1Q717R9 158 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 HSD11B1LQ7Z5J1 315 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 CDKN2AIPNLQ96HQ2 116 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 SUDS3Q9H7L9 328 aaPredicted RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 PPANQ9NQ55 473 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 USP36Q9P275 1121 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 EBF1Q9UH73 591 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 RABGEF1Q9UJ41 708 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 WDFY4Q6ZS81 3184 aa21.71■■□□□ 1.07
VCPKMT-204ENST00000491402 PSMD11O00231 422 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 TSPAN6O43657 245 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 NUDT17P0C025 328 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 BPIP17213 487 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 SPINT3P49223 89 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 RASSF3Q86WH2 238 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 CBARPQ8N350 705 aaPredicted RBP21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 CAMKK1Q8N5S9 505 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 OR14C36Q8NHC7 312 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 ACSS3Q9H6R3 686 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 ITM2CQ9NQX7 267 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 PRMT8Q9NR22 394 aaPredicted RBP21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 C20orf96Q9NUD7 363 aaPredicted RBP21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 FKBPLQ9UIM3 349 aa21.7■■□□□ 1.06
VCPKMT-204ENST00000491402 GOLGA8KD6RF30 607 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 GOLGA8TH3BQL2 631 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 H7C0S8 307 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 PIAS1O75925 651 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 APBB3O95704 486 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 C1QAP02745 245 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 SHBGP04278 402 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 ERVK-10P10266 1014 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 PDPK2PQ6A1A2 396 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 MICALCLQ6ZW33 695 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 FAM124AQ86V42 546 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 KCNMB4Q86W47 210 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 OR6P1Q8NGX9 317 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 CXorf40AQ8TE69 158 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 PKD2L2Q9NZM6 624 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 FNDC3AQ9Y2H6 1198 aaKnown RBP21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 PLXNA2O75051 1894 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 CCDC162PA2VCL2 907 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 GOLGA8CPA6NN73 597 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 MMP20O60882 483 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 PCDH8O95206 1070 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 C6P13671 934 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 GM2AP17900 193 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 DMWDQ09019 674 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 KBTBD12Q3ZCT8 623 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 HSP90AA5PQ58FG0 334 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 ZNF449Q6P9G9 518 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 RFLNAQ6ZTI6 216 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 Q6ZVL8 140 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 HDXQ7Z353 690 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 IQCKQ8N0W5 287 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 PLAAQ9Y263 795 aa21.69■■□□□ 1.06
VCPKMT-204ENST00000491402 DOCK9Q9BZ29 2069 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 OR51F1A6NGY5 319 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 GOT2P00505 430 aaKnown RBP21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 IGLV3-19P01714 112 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 ETV3P41162 512 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 MGAT5Q09328 741 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms