RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CHRNA4P43681 627 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 PSME3P61289 254 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CDC16Q13042 620 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 THEMIS2Q5TEJ8 643 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 PIK3R6Q5UE93 754 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CNSTQ6PJW8 725 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 DNAJB7Q7Z6W7 309 aaPredicted RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 FNDC5Q8NAU1 212 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 POP5Q969H6 163 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 SH3KBP1Q96B97 665 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 LINGO1Q96FE5 620 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 B3GALT6Q96L58 329 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 PPP3R2Q96LZ3 170 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CXCL16Q9H2A7 254 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ELOVL6Q9H5J4 265 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ZDHHC6Q9H6R6 413 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 UTP6Q9NYH9 597 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 C6orf203Q9P0P8 240 aaPredicted RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 SLC28A1O00337 649 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 KDM1AO60341 852 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CCL5P13501 91 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 RPL17P18621 184 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 IMPDH1P20839 514 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 DDX6P26196 483 aaKnown RBP eCLIP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 TLE2Q04725 743 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 PPIGQ13427 754 aaKnown RBP eCLIP7.34□□□□□ -1.233e-8■■■■■ 31.6
NPHP3-208ENST00000490993 CAPRIN1Q14444 709 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 DLG2Q15700 870 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 EP400NLQ6ZTU2 488 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 DSG4Q86SJ6 1040 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 SCD5Q86SK9 330 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 MAB21L3Q8N8X9 362 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 OR6Y1Q8NGX8 325 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 TIFAQ96CG3 184 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 MRGPRX2Q96LB1 330 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ACOX2Q99424 681 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 NUSAP1Q9BXS6 441 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 GPR62Q9BZJ7 368 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CIPCQ9C0C6 399 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 BPIFA1Q9NP55 256 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 MTRRQ9UBK8 725 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 PSAT1Q9Y617 370 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CPQQ9Y646 472 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 KIAA1217Q5T5P2 1943 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 KRT36O76013 467 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 FGF3P11487 239 aaPredicted RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CTNNB1P35222 781 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ETV4P43268 484 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 MAPK9P45984 424 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 LEPRP48357 1165 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 GSTA3Q16772 222 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 SGO1Q5FBB7 561 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 WLSQ5T9L3 541 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 DHDDSQ86SQ9 333 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 PGAM4Q8N0Y7 254 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 TCAIMQ8N3R3 496 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 STARD8Q92502 1023 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 HOPXQ9BPY8 73 aaPredicted RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 KCTD14Q9BQ13 255 aaPredicted RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 SPATA16Q9BXB7 569 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 TM6SF2Q9BZW4 377 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 MAPRE3Q9UPY8 281 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ITM2AO43736 263 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 ZBTB14O43829 449 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 KIF1CO43896 1103 aaKnown RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 LZTS3O60299 673 aaPredicted RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 ESRRBO95718 433 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 SLC2A4P14672 509 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 CD68P34810 354 aaPredicted RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 SPAM1P38567 509 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 RPL26P61254 145 aaKnown RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 BNIP2Q12982 314 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 CRY1Q16526 586 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 LSM12Q3MHD2 195 aaKnown RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 KIAA0319Q5VV43 1072 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 EPGNQ6UW88 154 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 IFNEQ86WN2 208 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 AADATQ8N5Z0 425 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 ATL1Q8WXF7 558 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 FAM162AQ96A26 154 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 TMEM159Q96B96 161 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 C19orf60Q96EN9 201 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 CCDC138Q96M89 665 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 DENND2DQ9H6A0 471 aaPredicted RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 TAS2R1Q9NYW7 299 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 LEF1Q9UJU2 399 aaPredicted RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 GLYATL1P3A0A0U1RQE8 302 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 HHLA1C9JL84 531 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 CNTN5O94779 1100 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 FTH1P02794 183 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 ATP6V1C1P21283 382 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 KCNQ1P51787 676 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 DSC1Q08554 894 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 SFSWAPQ12872 951 aaKnown RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 LCP2Q13094 533 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF598Q86UK7 904 aaKnown RBP7.33□□□□□ -1.24
NPHP3-208ENST00000490993 CILP2Q8IUL8 1156 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 LEMD2Q8NC56 503 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 ACTRT2Q8TDY3 377 aa7.33□□□□□ -1.24
NPHP3-208ENST00000490993 FATE1Q969F0 183 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms