RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LOXL2Q9Y4K0 774 aa19.71■□□□□ 0.75
SREBF1-216ENST00000490796 COL27A1Q8IZC6 1860 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-216ENST00000490796 ZNF462Q96JM2 2506 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 K7ENP7 123 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 PEX11BO96011 259 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 CTPS1P17812 591 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 GPR1P46091 355 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 EPHB1P54762 984 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 UBASH3AP57075 661 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 FANCCQ00597 558 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 HLTFQ14527 1009 aaKnown RBP eCLIP19.7■□□□□ 0.74
SREBF1-216ENST00000490796 IQCB1Q15051 598 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 INO80CQ6PI98 192 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-216ENST00000490796 Q6ZVL8 140 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 HSD11B1LQ7Z5J1 315 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 PELI3Q8N2H9 469 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 ZDHHC1Q8WTX9 485 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 IQCDQ96DY2 449 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 TEX101Q9BY14 249 aa19.7■□□□□ 0.74
SREBF1-216ENST00000490796 TRNAU1APQ9NX07 287 aaKnown RBP19.7■□□□□ 0.74
SREBF1-216ENST00000490796 RCOR3Q9P2K3 495 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-216ENST00000490796 NPIPB15A6NHN6 443 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-216ENST00000490796 GOLGA6L19H0YKK7 550 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 GJC1P36383 396 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 ZBED6P86452 979 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 CDK3Q00526 305 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 AMZ1Q400G9 498 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 HGSNATQ68CP4 663 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 TXNRD3NBQ6F5E7 133 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 DOK6Q6PKX4 331 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 PIM3Q86V86 326 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 GPBAR1Q8TDU6 330 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 SEMA3CQ99985 751 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 POLR1EQ9GZS1 481 aaKnown RBP19.69■□□□□ 0.74
SREBF1-216ENST00000490796 SPATS2LQ9NUQ6 558 aaKnown RBP19.69■□□□□ 0.74
SREBF1-216ENST00000490796 TAAR2Q9P1P5 351 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 SUFUQ9UMX1 484 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 LUC7L2Q9Y383 392 aaKnown RBP19.69■□□□□ 0.74
SREBF1-216ENST00000490796 TTLL3Q9Y4R7 772 aa19.69■□□□□ 0.74
SREBF1-216ENST00000490796 ARHGEF17Q96PE2 2063 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-216ENST00000490796 CYP1A2P05177 515 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 CEACAM5P06731 702 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 CA4P22748 312 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 LHCGRP22888 699 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 ALDH4A1P30038 563 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 MAPK10P53779 464 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 MAZP56270 477 aaKnown RBP19.68■□□□□ 0.74
SREBF1-216ENST00000490796 SLC25A11Q02978 314 aaKnown RBP19.68■□□□□ 0.74
SREBF1-216ENST00000490796 ZFYVE27Q5T4F4 411 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 TIGD7Q6NT04 549 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-216ENST00000490796 ALKBH5Q6P6C2 394 aaKnown RBP19.68■□□□□ 0.74
SREBF1-216ENST00000490796 SLC30A9Q6PML9 568 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 PCSK4Q6UW60 755 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 SFTPA2Q8IWL1 248 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.68■□□□□ 0.74
SREBF1-216ENST00000490796 KCTD6Q8NC69 237 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 SNRNP27Q8WVK2 155 aaKnown RBP19.68■□□□□ 0.74
SREBF1-216ENST00000490796 FRMD8Q9BZ67 464 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-216ENST00000490796 CBX8Q9HC52 389 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 SEPT10Q9P0V9 454 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 PCDHB11Q9Y5F2 797 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 COL6A6A6NMZ7 2263 aa19.68■□□□□ 0.74
SREBF1-216ENST00000490796 NVLO15381 856 aaKnown RBP19.67■□□□□ 0.74
SREBF1-216ENST00000490796 CPNE6O95741 557 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 CES1P23141 567 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 TEAD1P28347 426 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 PPM1FP49593 454 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-216ENST00000490796 ZFP36L1Q07352 338 aaKnown RBP19.67■□□□□ 0.74
SREBF1-216ENST00000490796 MMRN1Q13201 1228 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 TMEM164Q5U3C3 297 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 KIAA1614Q5VZ46 1190 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 TSPAN33Q86UF1 283 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 LUZP1Q86V48 1076 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 MAP7D3Q8IWC1 876 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 AP2M1Q96CW1 435 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 MCCC1Q96RQ3 725 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-216ENST00000490796 ZMYND15Q9H091 742 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 CDH19Q9H159 772 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 CD84Q9UIB8 345 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 DNPEPQ9ULA0 475 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 CAPN11Q9UMQ6 739 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 SSUH2Q9Y2M2 353 aa19.67■□□□□ 0.74
SREBF1-216ENST00000490796 CFAP46Q8IYW2 2715 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 A0A087X0T9 212 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 ECEL1O95672 775 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 FGF1P05230 155 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 PYGLP06737 847 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 FAM228BP0C875 321 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 ITIH1P19827 911 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 AK4P27144 223 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-216ENST00000490796 GARSP41250 739 aaKnown RBP19.66■□□□□ 0.74
SREBF1-216ENST00000490796 OR1D5P58170 312 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 CTBSQ01459 385 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 DPTQ07507 201 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 LY6DQ14210 128 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 IFI16Q16666 785 aaKnown RBP19.66■□□□□ 0.74
SREBF1-216ENST00000490796 LRRC66Q68CR7 880 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 USP53Q70EK8 1073 aa19.66■□□□□ 0.74
SREBF1-216ENST00000490796 CBARPQ8N350 705 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-216ENST00000490796 TEX26Q8N6G2 289 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms