RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PRLP01236 227 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 IFI35P80217 286 aaPredicted RBP31.32■■■□□ 2.6
LDB1-204ENST00000490751 CDK3Q00526 305 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 ZBTB17Q13105 803 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 NPNTQ6UXI9 565 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 RFLNAQ6ZTI6 216 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 TAF8Q7Z7C8 310 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 LPCAT1Q8NF37 534 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 PCDH9Q9HC56 1237 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 CD84Q9UIB8 345 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 CAPN8A6NHC0 703 aa31.31■■■□□ 2.6
LDB1-204ENST00000490751 CASC3O15234 703 aaKnown RBP31.31■■■□□ 2.6
LDB1-204ENST00000490751 USP12O75317 370 aa31.31■■■□□ 2.6
LDB1-204ENST00000490751 ZFXP17010 805 aaPredicted RBP31.31■■■□□ 2.6
LDB1-204ENST00000490751 ZNF30P17039 623 aa31.31■■■□□ 2.6
LDB1-204ENST00000490751 TEAD1P28347 426 aa31.31■■■□□ 2.6
LDB1-204ENST00000490751 NOP2P46087 812 aaKnown RBP31.31■■■□□ 2.6
LDB1-204ENST00000490751 AP1B1Q10567 949 aa31.31■■■□□ 2.6
LDB1-204ENST00000490751 ISXQ2M1V0 245 aa31.31■■■□□ 2.6
LDB1-204ENST00000490751 COL28A1Q2UY09 1125 aa31.31■■■□□ 2.6
LDB1-204ENST00000490751 CNTD1Q8N815 330 aa31.31■■■□□ 2.6
LDB1-204ENST00000490751 SUDS3Q9H7L9 328 aaPredicted RBP31.31■■■□□ 2.6
LDB1-204ENST00000490751 A0A087WV48 116 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 CD86P42081 329 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 HADHBP55084 474 aaKnown RBP31.3■■■□□ 2.6
LDB1-204ENST00000490751 RPL26P61254 145 aaKnown RBP31.3■■■□□ 2.6
LDB1-204ENST00000490751 DYNLT1P63172 113 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 PTSQ03393 145 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 DPTQ07507 201 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 PDK1Q15118 436 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 MFSD7Q6UXD7 560 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 RBM44Q6ZP01 1051 aaKnown RBP31.3■■■□□ 2.6
LDB1-204ENST00000490751 FAM46DQ8NEK8 389 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 CCL4L1Q8NHW4 92 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 CCDC74AQ96AQ1 378 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 AP2M1Q96CW1 435 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 OLFM3Q96PB7 478 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 FRMD8Q9BZ67 464 aaPredicted RBP31.3■■■□□ 2.6
LDB1-204ENST00000490751 ABCG8Q9H221 673 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 SYNDIG1Q9H7V2 258 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 CARS2Q9HA77 564 aaKnown RBP31.3■■■□□ 2.6
LDB1-204ENST00000490751 DNPEPQ9ULA0 475 aa31.3■■■□□ 2.6
LDB1-204ENST00000490751 RPL26L1Q9UNX3 145 aaKnown RBP31.3■■■□□ 2.6
LDB1-204ENST00000490751 TCEA3O75764 348 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 LCA5LO95447 670 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 CEACAM5P06731 702 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 MMP2P08253 660 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 GPR1P46091 355 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 STC1P52823 247 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 FAM182AQ5T1J6 154 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 WDR48Q8TAF3 677 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 CEP41Q9BYV8 373 aa31.29■■■□□ 2.6
LDB1-204ENST00000490751 PPP1R12AO14974 1030 aaPredicted RBP31.28■■■□□ 2.6
LDB1-204ENST00000490751 MPOP05164 745 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 ZNF75DP51815 510 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 GABREP78334 506 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 SKOR1P84550 965 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 CCDC170Q8IYT3 715 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 GPR156Q8NFN8 814 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 SCAMP4Q969E2 229 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 RBSNQ9H1K0 784 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 GOLPH3Q9H4A6 298 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 SEPT10Q9P0V9 454 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 RABGEF1Q9UJ41 708 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 TFR2Q9UP52 801 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 PCDHA13Q9Y5I0 950 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 ALG6Q9Y672 507 aa31.28■■■□□ 2.6
LDB1-204ENST00000490751 PSTPIP1O43586 416 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 SOD1P00441 154 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 FUCA1P04066 466 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 ACTN2P35609 894 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 SPIDRQ14159 915 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 TBC1D25Q3MII6 688 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 ZNF765Q7L2R6 523 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 SNIP1Q8TAD8 396 aaKnown RBP31.27■■■□□ 2.6
LDB1-204ENST00000490751 PTCD2Q8WV60 388 aaKnown RBP31.27■■■□□ 2.6
LDB1-204ENST00000490751 LYSMD1Q96S90 227 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 ENTPD2Q9Y5L3 495 aa31.27■■■□□ 2.6
LDB1-204ENST00000490751 CLDN7O95471 211 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 CYLC1P35663 651 aaPredicted RBP31.26■■■□□ 2.59
LDB1-204ENST00000490751 EIF2S3P41091 472 aaKnown RBP31.26■■■□□ 2.59
LDB1-204ENST00000490751 CDKN2BP42772 138 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 GNPDA1P46926 289 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 SPA17Q15506 151 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 QPCTQ16769 361 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 OGFOD3Q6PK18 319 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 ADAMTSL4Q6UY14 1074 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 B4GALNT4Q76KP1 1039 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 SFTPA2Q8IWL1 248 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 OR6C4Q8NGE1 309 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 FGF11Q92914 225 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 ATXN7L3BQ96GX2 97 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 DPEP2Q9H4A9 486 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 SUFUQ9UMX1 484 aa31.26■■■□□ 2.59
LDB1-204ENST00000490751 ARHGEF17Q96PE2 2063 aaPredicted RBP31.25■■■□□ 2.59
LDB1-204ENST00000490751 B4DGG1 531 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 NOBOXO60393 691 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 POLD2P49005 469 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 TAZQ16635 292 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 DOK6Q6PKX4 331 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms