RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 IRAK1BP1Q5VVH5 260 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 HIST2H2BCQ6DN03 193 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 METTL2BQ6P1Q9 378 aaKnown RBP3.7□□□□□ -1.82
HMGN1-218ENST00000490032 SLC22A25Q6T423 547 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 LCTLQ6UWM7 567 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 SLC26A9Q7LBE3 791 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 LRRTM4Q86VH4 590 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 ZNF34Q8IZ26 560 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 RNF113BQ8IZP6 322 aaKnown RBP3.7□□□□□ -1.82
HMGN1-218ENST00000490032 SPATA6LQ8N4H0 392 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 DMBX1Q8NFW5 382 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 OR2AK2Q8NG84 335 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 HUS1BQ8NHY5 278 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 ZCCHC10Q8TBK6 192 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 DUSP19Q8WTR2 217 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 METTL2AQ96IZ6 378 aaKnown RBP3.7□□□□□ -1.82
HMGN1-218ENST00000490032 FAM110AQ9BQ89 295 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 FUZQ9BT04 418 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 GLIS2Q9BZE0 524 aaPredicted RBP3.7□□□□□ -1.82
HMGN1-218ENST00000490032 PADI1Q9ULC6 663 aa3.7□□□□□ -1.82
HMGN1-218ENST00000490032 CAPN9O14815 690 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 EDIL3O43854 480 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 FGF5P12034 268 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 COX7A2P14406 83 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 VEGFCP49767 419 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 UFM1P61960 85 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 PPP2R5BQ15173 497 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 SLC45A4Q5BKX6 768 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 RRM2BQ7LG56 351 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 TDRPQ86YL5 185 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 EPHX4Q8IUS5 362 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 ANKRD18AQ8IVF6 992 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 WDSUB1Q8N9V3 476 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 TRIM63Q969Q1 353 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 SLC41A2Q96JW4 573 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 H2AFJQ9BTM1 129 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 LRRC1Q9BTT6 524 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 GPR63Q9BZJ6 419 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 TKTL2Q9H0I9 626 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 PPP1R3EQ9H7J1 279 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 FKRPQ9H9S5 495 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 HINT3Q9NQE9 182 aaKnown RBP3.69□□□□□ -1.82
HMGN1-218ENST00000490032 PPP1R14DQ9NXH3 145 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 TAAR2Q9P1P5 351 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 A4GNTQ9UNA3 340 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 SCINQ9Y6U3 715 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 SNED1Q8TER0 1413 aa3.69□□□□□ -1.82
HMGN1-218ENST00000490032 SMCHD1A6NHR9 2005 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 IFNL4K9M1U5 179 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 EIF3FO00303 357 aaPredicted RBP3.68□□□□□ -1.82
HMGN1-218ENST00000490032 SEC14L5O43304 696 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 ZG16O60844 167 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 FTCDO95954 541 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 HOXB5P09067 269 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 HSD3B1P14060 373 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 MYOD1P15172 320 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 BDKRB2P30411 391 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 CORO1AP31146 461 aaKnown RBP3.68□□□□□ -1.82
HMGN1-218ENST00000490032 LINC01547P58512 204 aaPredicted RBP3.68□□□□□ -1.82
HMGN1-218ENST00000490032 TLE2Q04725 743 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 FOXD4Q12950 439 aaPredicted RBP3.68□□□□□ -1.82
HMGN1-218ENST00000490032 CAMK1Q14012 370 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 GGNBP1Q5YKI7 109 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 SLC24A4Q8NFF2 622 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 ZNF501Q96CX3 271 aaPredicted RBP3.68□□□□□ -1.82
HMGN1-218ENST00000490032 ZBTB10Q96DT7 871 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 C1QTNF5Q9BXJ0 243 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 NDST4Q9H3R1 872 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 ZNF696Q9H7X3 374 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 GPR108Q9NPR9 543 aa3.68□□□□□ -1.82
HMGN1-218ENST00000490032 TTC7AQ9ULT0 858 aaPredicted RBP3.68□□□□□ -1.82
HMGN1-218ENST00000490032 TEX13CA0A0J9YWL9 993 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 IFRD1O00458 451 aaPredicted RBP3.67□□□□□ -1.82
HMGN1-218ENST00000490032 APOHP02749 345 aaPredicted RBP3.67□□□□□ -1.82
HMGN1-218ENST00000490032 SERPINB2P05120 415 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 IFIT1P09914 478 aaKnown RBP3.67□□□□□ -1.82
HMGN1-218ENST00000490032 PAX1P15863 534 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 GNL1P36915 607 aaPredicted RBP3.67□□□□□ -1.82
HMGN1-218ENST00000490032 VAMP2P63027 116 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 PDE1BQ01064 536 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 NAE1Q13564 534 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 HIST2H2BDQ6DRA6 164 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 QSOX2Q6ZRP7 698 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 ASB18Q6ZVZ8 466 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 GCC1Q96CN9 775 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 ALG14Q96F25 216 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 SYT17Q9BSW7 474 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 SCRT2Q9NQ03 307 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 HCFC1R1Q9NWW0 138 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 MPP6Q9NZW5 540 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 ERVK-11Q9UQG0 969 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 DLGAP4Q9Y2H0 992 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 LOXL2Q9Y4K0 774 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 UTYO14607 1347 aa3.67□□□□□ -1.82
HMGN1-218ENST00000490032 A0A1W2PQM1 296 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 CTAGE9A4FU28 777 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 TNPO2O14787 897 aaKnown RBP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 LDLRAD4O15165 306 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 WDR1O75083 606 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms