RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 KDELC1Q6UW63 502 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 PHACTR4Q8IZ21 702 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 FUBP1Q96AE4 644 aaKnown RBP17.32■□□□□ 0.36
MDC1-206ENST00000489540 AP2M1Q96CW1 435 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 CNDP2Q96KP4 475 aaKnown RBP17.32■□□□□ 0.36
MDC1-206ENST00000489540 WDR92Q96MX6 357 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 PPP1R2P1Q96PQ5 205 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 DUSP23Q9BVJ7 150 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 TEX101Q9BY14 249 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 ABCG8Q9H221 673 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 GBA3Q9H227 469 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 PCNX2A6NKB5 2137 aa17.32■□□□□ 0.36
MDC1-206ENST00000489540 C5orf60A6NFR6 353 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 TNFRSF10CO14798 259 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 ZSCAN12O43309 604 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 AQP9O43315 295 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 RASGRP1O95267 797 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 C1SP09871 688 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 FTH1P19P0C7X4 201 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 PMLP29590 882 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 HK3P52790 923 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 GEMP55040 296 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 SRP54P61011 504 aaKnown RBP17.31■□□□□ 0.36
MDC1-206ENST00000489540 PRPSAP1Q14558 356 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 RAET1GQ6H3X3 334 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 SLC13A5Q86YT5 568 aaPredicted RBP17.31■□□□□ 0.36
MDC1-206ENST00000489540 ZNF548Q8NEK5 533 aaPredicted RBP17.31■□□□□ 0.36
MDC1-206ENST00000489540 OR56A4Q8NGH8 313 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 OR4C6Q8NH72 309 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 SLC35B2Q8TB61 432 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 LMX1AQ8TE12 382 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 OXNAD1Q96HP4 312 aaPredicted RBP17.31■□□□□ 0.36
MDC1-206ENST00000489540 PDLIM2Q96JY6 352 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 SPATA13Q96N96 652 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 ZFYVE1Q9HBF4 777 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 PHPT1Q9NRX4 125 aaPredicted RBP17.31■□□□□ 0.36
MDC1-206ENST00000489540 NLGN3Q9NZ94 848 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 PKD2L2Q9NZM6 624 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 KLQ9UEF7 1012 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 APOBEC3BQ9UH17 382 aaKnown RBP17.31■□□□□ 0.36
MDC1-206ENST00000489540 AAR2Q9Y312 384 aaKnown RBP17.31■□□□□ 0.36
MDC1-206ENST00000489540 SPTBN2O15020 2390 aa17.31■□□□□ 0.36
MDC1-206ENST00000489540 TCRBV7S2A1N4TA0A589 114 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 GOLGA6CA6NDK9 693 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 GOLGA6BA6NDN3 693 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 K7ESM1 405 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 TRIM38O00635 465 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 ENC1O14682 589 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 TNFP01375 233 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 ATXN1LP0C7T5 689 aaKnown RBP17.3■□□□□ 0.36
MDC1-206ENST00000489540 GOLGA6DP0CG33 693 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 MYCLP1P12525 358 aaPredicted RBP17.3■□□□□ 0.36
MDC1-206ENST00000489540 GPR1P46091 355 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 SPINT3P49223 89 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 ALG11Q2TAA5 492 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 ADAMTSL4Q6UY14 1074 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 RFLNAQ6ZTI6 216 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 HID1Q8IV36 788 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 PELI3Q8N2H9 469 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 SDR16C5Q8N3Y7 309 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 FSTL5Q8N475 847 aaPredicted RBP17.3■□□□□ 0.36
MDC1-206ENST00000489540 TSACCQ96A04 125 aaPredicted RBP17.3■□□□□ 0.36
MDC1-206ENST00000489540 MRGPRX2Q96LB1 330 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 CDH19Q9H159 772 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 FAM83DQ9H4H8 585 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 RAD18Q9NS91 495 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 GOLGA6AQ9NYA3 693 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 R3HDM2Q9Y2K5 976 aaKnown RBP17.3■□□□□ 0.36
MDC1-206ENST00000489540 DGKBQ9Y6T7 804 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 TPP1O14773 563 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 SIGLEC6O43699 453 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 CKMT2P17540 419 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 HLA-DPA1P20036 260 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 STIP1P31948 543 aaKnown RBP17.3■□□□□ 0.36
MDC1-206ENST00000489540 PRRT3Q5FWE3 981 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 TMC3Q7Z5M5 1100 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 SLCO6A1Q86UG4 719 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 HEATR4Q86WZ0 1026 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 FAM71DQ8N9W8 422 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 IPMKQ8NFU5 416 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 CCDC110Q8TBZ0 833 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 SCAMP4Q969E2 229 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 LGR4Q9BXB1 951 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 FSD1LQ9BXM9 530 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 TLR10Q9BXR5 811 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 GPR63Q9BZJ6 419 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 TRABDQ9H4I3 376 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 CD84Q9UIB8 345 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 PNMA8BQ9ULN7 279 aaPredicted RBP17.3■□□□□ 0.36
MDC1-206ENST00000489540 PCDHGA1Q9Y5H4 931 aa17.3■□□□□ 0.36
MDC1-206ENST00000489540 TMEM202A6NGA9 273 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 F5H423 210 aaPredicted RBP17.29■□□□□ 0.36
MDC1-206ENST00000489540 FFAR2O15552 330 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 GCATO75600 419 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 GIMD1P0DJR0 217 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 CDK4P11802 303 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 CTSEP14091 401 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 CDK3Q00526 305 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 ELOCQ15369 112 aa17.29■□□□□ 0.36
MDC1-206ENST00000489540 SLC1A5Q15758 541 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms