RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 GPR150Q8NGU9 434 aa20.87■□□□□ 0.93
SND1-214ENST00000489417 PBXIP1Q96AQ6 731 aa20.87■□□□□ 0.93
SND1-214ENST00000489417 RSPH9Q9H1X1 276 aaPredicted RBP20.87■□□□□ 0.93
SND1-214ENST00000489417 DYRK4Q9NR20 520 aa20.87■□□□□ 0.93
SND1-214ENST00000489417 CATSPERZQ9NTU4 200 aa20.87■□□□□ 0.93
SND1-214ENST00000489417 SENP1Q9P0U3 644 aa20.87■□□□□ 0.93
SND1-214ENST00000489417 ACTL7BQ9Y614 415 aa20.87■□□□□ 0.93
SND1-214ENST00000489417 CD3EAPO15446 510 aaKnown RBP20.86■□□□□ 0.93
SND1-214ENST00000489417 RNASEH1O60930 286 aaKnown RBP20.86■□□□□ 0.93
SND1-214ENST00000489417 MT-ND3P03897 115 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 F7P08709 466 aaPredicted RBP20.86■□□□□ 0.93
SND1-214ENST00000489417 ZNF30P17039 623 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 OGNP20774 298 aaKnown RBP20.86■□□□□ 0.93
SND1-214ENST00000489417 MC4RP32245 332 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 SUOXP51687 545 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 STARD3Q14849 445 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 MRNIPQ6NTE8 343 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 TXNDC5Q8NBS9 432 aaKnown RBP20.86■□□□□ 0.93
SND1-214ENST00000489417 SGSM3Q96HU1 749 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 MCMBPQ9BTE3 642 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 MARCH4Q9P2E8 410 aaPredicted RBP20.86■□□□□ 0.93
SND1-214ENST00000489417 THEGQ9P2T0 379 aa20.86■□□□□ 0.93
SND1-214ENST00000489417 A0A1W2PPM1 405 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 HMX2A2RU54 273 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 ADAM23O75077 832 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 AHSGP02765 367 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 ITGA2BP08514 1039 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 C1SP09871 688 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 NR1D1P20393 614 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 FOXN2P32314 431 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 HPDP32754 393 aaPredicted RBP20.85■□□□□ 0.93
SND1-214ENST00000489417 MMP12P39900 470 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 STC1P52823 247 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 LIMK2P53671 638 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 FASTKD1Q53R41 847 aaKnown RBP20.85■□□□□ 0.93
SND1-214ENST00000489417 MROH9Q5TGP6 573 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 FBXL19Q6PCT2 694 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 ERN2Q76MJ5 926 aaKnown RBP20.85■□□□□ 0.93
SND1-214ENST00000489417 CILP2Q8IUL8 1156 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 CBARPQ8N350 705 aaPredicted RBP20.85■□□□□ 0.93
SND1-214ENST00000489417 OR2T3Q8NH03 318 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 FAM76AQ8TAV0 307 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 HDAC8Q9BY41 377 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 RHOJQ9H4E5 214 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 FBRSQ9HAH7 460 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 SORCS3Q9UPU3 1222 aa20.85■□□□□ 0.93
SND1-214ENST00000489417 FNDC3AQ9Y2H6 1198 aaKnown RBP20.85■□□□□ 0.93
SND1-214ENST00000489417 POLR3GO15318 223 aaPredicted RBP20.84■□□□□ 0.93
SND1-214ENST00000489417 HOXB2P14652 356 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 BPIP17213 487 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 GABRB3P28472 473 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 CD151P48509 253 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 NEK3P51956 506 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 XIAPP98170 497 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 SATB1Q01826 763 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 PTSQ03393 145 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 RALGDSQ12967 914 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 DNAJC3Q13217 504 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 PEX6Q13608 980 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 CCINQ13939 588 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 CST6Q15828 149 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 ZNF776Q68DI1 518 aaPredicted RBP20.84■□□□□ 0.93
SND1-214ENST00000489417 KIAA1211LQ6NV74 962 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 GALNT7Q86SF2 657 aa20.84■□□□□ 0.93
SND1-214ENST00000489417 SDCCAG8Q86SQ7 713 aaPredicted RBP20.84■□□□□ 0.93
SND1-214ENST00000489417 ZC3HC1Q86WB0 502 aaKnown RBP20.84■□□□□ 0.93
SND1-214ENST00000489417 FBXO6Q9NRD1 293 aaPredicted RBP20.84■□□□□ 0.93
SND1-214ENST00000489417 PLK4O00444 970 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 ADH1BP00325 375 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 ADRB3P13945 408 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 CD72P21854 359 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 SPAM1P38567 509 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 ABCG1P45844 678 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 LEPRP48357 1165 aaKnown RBP20.83■□□□□ 0.93
SND1-214ENST00000489417 PTPN5P54829 565 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 PPP2R2AP63151 447 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 ELP6Q0PNE2 266 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 SEMA3AQ14563 771 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 HSF5Q4G112 596 aaPredicted RBP20.83■□□□□ 0.93
SND1-214ENST00000489417 ZRANB3Q5FWF4 1079 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 ZNF852Q6ZMS4 543 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 TIFABQ6ZNK6 161 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 SCG3Q8WXD2 468 aaKnown RBP20.83■□□□□ 0.93
SND1-214ENST00000489417 ATXN7L3BQ96GX2 97 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 VPS39Q96JC1 886 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 SERAC1Q96JX3 654 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 PKD2L2Q9NZM6 624 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 APPL1Q9UKG1 709 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 CA14Q9ULX7 337 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 NDRG2Q9UN36 371 aaKnown RBP20.83■□□□□ 0.93
SND1-214ENST00000489417 SLC30A1Q9Y6M5 507 aa20.83■□□□□ 0.93
SND1-214ENST00000489417 CKAP5Q14008 2032 aa20.83■□□□□ 0.92
SND1-214ENST00000489417 SCN8AQ9UQD0 1980 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 MID1O15344 667 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 SPINT1O43278 529 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 S1PR4O95977 384 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 BRAFP15056 766 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 CREB1P16220 341 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 COL9A1P20849 921 aa20.82■□□□□ 0.92
SND1-214ENST00000489417 COPAP53621 1224 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms