RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ZNF75DP51815 510 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 NEK3P51956 506 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 MAP3K7CLP57077 242 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 ORC2Q13416 577 aaPredicted RBP7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 CDH18Q13634 790 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 IQCB1Q15051 598 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 POSTNQ15063 836 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 ZNF174Q15697 407 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 SEPT7Q16181 437 aaKnown RBP7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 PRAMEF17Q5VTA0 474 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 IZUMO3Q5VZ72 239 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 ANKRD40Q6AI12 368 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 SARM1Q6SZW1 724 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 Q6ZPB1 254 aaPredicted RBP7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 C11orf57Q6ZUT1 292 aaPredicted RBP7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 CCDC186Q7Z3E2 898 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 VPS36Q86VN1 386 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 FUKQ8N0W3 1084 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 KIAA0895Q8NCT3 520 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 RASSF8Q8NHQ8 419 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 CCL4L1Q8NHW4 92 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 TNFRSF25Q93038 417 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 HPDLQ96IR7 371 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 CNDP1Q96KN2 507 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 PRICKLE1Q96MT3 831 aaPredicted RBP7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 MED10Q9BTT4 135 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 TMEM168Q9H0V1 697 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 MBNL1Q9NR56 388 aaKnown RBP7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 SPATS2LQ9NUQ6 558 aaKnown RBP7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 STIM2Q9P246 746 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 KCNG1Q9UIX4 513 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 L3MBTL1Q9Y468 752 aa7.48□□□□□ -1.21
EXOSC3-206ENST00000489414 CMYA5Q8N3K9 4069 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 CCDC78A2IDD5 438 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 TMEM110-MUSTN1A8MSY1 372 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 IKBKBO14920 756 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 IRAK2O43187 625 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 CBFA2T2O43439 604 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 ZNF500O60304 480 aaPredicted RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 NEMFO60524 1076 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 TIAF1O95411 115 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 ERBB2P04626 1255 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 FGF1P05230 155 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 ANKRD34CP0C6C1 535 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 PYGMP11217 842 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 UNGP13051 313 aaPredicted RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 HTR1BP28222 390 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 CHRNA3P32297 505 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 THBS2P35442 1172 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 NCKAP1LP55160 1127 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 SOX8P57073 446 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 PNOCQ13519 176 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 NFATC4Q14934 902 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 FAM174BQ3ZCQ3 159 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 FAM133BQ5BKY9 247 aaKnown RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 CT47A1Q5JQC4 288 aaPredicted RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 PRR31Q5SQ13 230 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 C10orf62Q5T681 223 aaPredicted RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 FAM69BQ5VUD6 431 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 C12orf54Q6X4T0 127 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 DTHD1Q6ZMT9 781 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 C1orf186Q6ZWK4 172 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 MEX3DQ86XN8 651 aaKnown RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 IRF2BP1Q8IU81 584 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 P3H2Q8IVL5 708 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 ZZZ3Q8IYH5 903 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 LRRC75A-AS1Q8N1F1 130 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 CARNMT1Q8N4J0 409 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 PDILTQ8N807 584 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 IQUBQ8NA54 791 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 MLKLQ8NB16 471 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 SPC24Q8NBT2 197 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 CLEC1AQ8NC01 280 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 HJURPQ8NCD3 748 aaPredicted RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 ZDHHC1Q8WTX9 485 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 CACTINQ8WUQ7 758 aaKnown RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 ERCC4Q92889 916 aaPredicted RBP7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 SH3KBP1Q96B97 665 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 MRFAP1L1Q96HT8 127 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 ELMO2Q96JJ3 720 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 PWWP2AQ96N64 755 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 FCRL4Q96PJ5 515 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 OR6C1Q96RD1 312 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 SLC6A16Q9GZN6 736 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 SNX7Q9UNH6 387 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 ZNF835Q9Y2P0 537 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 HERC2O95714 4834 aa7.47□□□□□ -1.21
EXOSC3-206ENST00000489414 A8MXQ7 604 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 KIF1CO43896 1103 aaKnown RBP7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 WFS1O76024 890 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 FAM163BP0C2L3 166 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 PRPHP41219 470 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 NUMBP49757 651 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 GSDMDP57764 484 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 RPS24P62847 133 aaKnown RBP7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 SH3BP2P78314 561 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 MYL5Q02045 173 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 SULT2A1Q06520 285 aa7.46□□□□□ -1.22
EXOSC3-206ENST00000489414 BIRC2Q13490 618 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms