RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 KLHL8Q9P2G9 620 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 CD84Q9UIB8 345 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 KLF15Q9UIH9 416 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 ALG6Q9Y672 507 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 EPN1Q9Y6I3 576 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 DGKBQ9Y6T7 804 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 ZFYVE26Q68DK2 2539 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 PRSS38A1L453 326 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 CAPN8A6NHC0 703 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 SOWAHDA6NJG2 315 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 SRRM3A6NNA2 597 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-232ENST00000489053 H7C0C1 242 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 NRDCO43847 1150 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 CSO75390 466 aaKnown RBP9.11□□□□□ -0.95
HDAC6-232ENST00000489053 RBMS1P29558 406 aaKnown RBP9.11□□□□□ -0.95
HDAC6-232ENST00000489053 ACTN2P35609 894 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 ATP5OP48047 213 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-232ENST00000489053 KIF5AQ12840 1032 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 LLGL1Q15334 1064 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 FOXR1Q6PIV2 292 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 CRTC1Q6UUV9 634 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 MFSD7Q6UXD7 560 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 NPNTQ6UXI9 565 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 SPOCD1Q6ZMY3 1216 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 KDELC2Q7Z4H8 507 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 TSPAN33Q86UF1 283 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 PROSER1Q86XN7 944 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 GALNT13Q8IUC8 556 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 SLC35F3Q8IY50 421 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 KATNAL2Q8IYT4 538 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 NRSN1Q8IZ57 195 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 SYCE1Q8N0S2 351 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 LSMEM2Q8N112 164 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 UBL4BQ8N7F7 174 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 SPC24Q8NBT2 197 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 VOPP1Q96AW1 172 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 HAUS1Q96CS2 278 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 SRPK1Q96SB4 655 aaKnown RBP9.11□□□□□ -0.95
HDAC6-232ENST00000489053 RBM15Q96T37 977 aaKnown RBP eCLIP9.11□□□□□ -0.95
HDAC6-232ENST00000489053 CCDC3Q9BQI4 270 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 BOCQ9BWV1 1114 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 GPR63Q9BZJ6 419 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 STRADBQ9C0K7 418 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 NRSN2Q9GZP1 204 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 CDH19Q9H159 772 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 SLC25A51Q9H1U9 297 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 FGF22Q9HCT0 170 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 RAXQ9Y2V3 346 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 GPSM3Q9Y4H4 160 aa9.11□□□□□ -0.95
HDAC6-232ENST00000489053 GOLGA4Q13439 2230 aaKnown RBP9.11□□□□□ -0.95
HDAC6-232ENST00000489053 CCDC66A2RUB6 948 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 EME2A4GXA9 379 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 RGSL1A5PLK6 1076 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 GOLGA6L9A6NEM1 432 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 TMEM202A6NGA9 273 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 RHPN2P1A8MT19 583 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 TMX2-CTNND1H3BSU7 103 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 USP12O75317 370 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 PMPCBO75439 489 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 TCEA3O75764 348 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 KRT37O76014 449 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 LCA5LO95447 670 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 CELA2BP08218 269 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 PDHA1P08559 390 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 LHCGRP22888 699 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 TEAD1P28347 426 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 TRIM23P36406 574 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 CDKN2BP42772 138 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 HADHBP55084 474 aaKnown RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 GABREP78334 506 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 CDK3Q00526 305 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 CDK18Q07002 472 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 NIPAL4Q0D2K0 466 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 SLC10A2Q12908 348 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 ZBTB17Q13105 803 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 GALNT3Q14435 633 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 ALG1LQ6GMV1 187 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 SLC30A9Q6PML9 568 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 ADAMTSL4Q6UY14 1074 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 MARK2Q7KZI7 788 aaKnown RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 ZNF765Q7L2R6 523 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 ZC3H18Q86VM9 953 aaKnown RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 CACTIN-AS1Q8N1I8 211 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 DCBLD1Q8N8Z6 715 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 Q8N9G6 341 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 KYQ8NBH2 561 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 EXD1Q8NHP7 514 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 PIH1D2Q8WWB5 315 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 CCDC74AQ96AQ1 378 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 GRAMD1AQ96CP6 724 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 GFM1Q96RP9 751 aaKnown RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 RIOK2Q9BVS4 552 aaKnown RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 HEMGNQ9BXL5 484 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 FSD1LQ9BXM9 530 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 TMEM121BQ9BXQ6 578 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-232ENST00000489053 CLPBQ9H078 707 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 TMEM168Q9H0V1 697 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 GOLPH3Q9H4A6 298 aa9.1□□□□□ -0.95
HDAC6-232ENST00000489053 FAM83DQ9H4H8 585 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms