RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CNOT1A5YKK6 2376 aaKnown RBP12.87□□□□□ -0.35
PHF1-210ENST00000488767 ASCC3Q8N3C0 2202 aaKnown RBP12.87□□□□□ -0.35
PHF1-210ENST00000488767 SCAMP1O15126 338 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 FFAR2O15552 330 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 KIF5CO60282 957 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 TNFP01375 233 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 SLC4A1P02730 911 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 CDK4P11802 303 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 MYCLP1P12525 358 aaPredicted RBP12.87□□□□□ -0.35
PHF1-210ENST00000488767 HLA-DPA1P20036 260 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 TEAD1P28347 426 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 TRIM23P36406 574 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 STC1P52823 247 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 WNT3AP56704 352 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 SRP54P61011 504 aaKnown RBP12.87□□□□□ -0.35
PHF1-210ENST00000488767 DAB2P98082 770 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 PTSQ03393 145 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 KLF1Q13351 362 aaPredicted RBP12.87□□□□□ -0.35
PHF1-210ENST00000488767 ELOCQ15369 112 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 PRRT3Q5FWE3 981 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 ANKRD20A2Q5SQ80 823 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 ANKRD20A1Q5TYW2 823 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 ANKRD20A3Q5VUR7 823 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 RD3Q7Z3Z2 195 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 HEATR4Q86WZ0 1026 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 HID1Q8IV36 788 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 PLA2G15Q8NCC3 412 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 ZNF548Q8NEK5 533 aaPredicted RBP12.87□□□□□ -0.35
PHF1-210ENST00000488767 IPMKQ8NFU5 416 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 OR4C6Q8NH72 309 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 SPATA13Q96N96 652 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 FAM118BQ9BPY3 351 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 HERPUD2Q9BSE4 406 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 TRABDQ9H4I3 376 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 HACD3Q9P035 362 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 MOSPD1Q9UJG1 213 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 CSNK1G3Q9Y6M4 447 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 DCHS1Q96JQ0 3298 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 KNL1Q8NG31 2342 aa12.87□□□□□ -0.35
PHF1-210ENST00000488767 MED19A0JLT2 244 aaPredicted RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 F5H423 210 aaPredicted RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 ENC1O14682 589 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 TNFRSF10CO14798 259 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 CLDN7O95471 211 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 FGF1P05230 155 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 ANXA6P08133 673 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 FTH1P19P0C7X4 201 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 STIP1P31948 543 aaKnown RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 CD68P34810 354 aaPredicted RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 RPIAP49247 311 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 DUSP3P51452 185 aaPredicted RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 HK3P52790 923 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 CCDC173Q0VFZ6 552 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 FOXC1Q12948 553 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 EIF2B5Q13144 721 aaKnown RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 PEX6Q13608 980 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 P3H1Q32P28 736 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 CCDC157Q569K6 752 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 ZDHHC20Q5W0Z9 365 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 TECPR1Q7Z6L1 1165 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 NLRP8Q86W28 1048 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 GKN2Q86XP6 184 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 SLC13A5Q86YT5 568 aaPredicted RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 SDR16C5Q8N3Y7 309 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 FAM71DQ8N9W8 422 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 BAHD1Q8TBE0 780 aaPredicted RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 FUBP1Q96AE4 644 aaKnown RBP12.86□□□□□ -0.35
PHF1-210ENST00000488767 TADA1Q96BN2 335 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 TRIB3Q96RU7 358 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 FAM83DQ9H4H8 585 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 C10orf88Q9H8K7 445 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 USP29Q9HBJ7 922 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 HOMER3Q9NSC5 361 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 CD84Q9UIB8 345 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 ZNF148Q9UQR1 794 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 ZKSCAN5Q9Y2L8 839 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 ZNF711Q9Y462 761 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 JRKLQ9Y4A0 524 aa12.86□□□□□ -0.35
PHF1-210ENST00000488767 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 C5orf60A6NFR6 353 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 C1SP09871 688 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 CKMT2P17540 419 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 GM2AP17900 193 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 SPINT3P49223 89 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 CDK3Q00526 305 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 IHHQ14623 411 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 PTPRRQ15256 657 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 ALG11Q2TAA5 492 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 ZCCHC8Q6NZY4 707 aaKnown RBP12.85□□□□□ -0.35
PHF1-210ENST00000488767 KDELC1Q6UW63 502 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 ADAMTSL4Q6UY14 1074 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 KDM7AQ6ZMT4 941 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 LYSMD3Q7Z3D4 306 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 CBARPQ8N350 705 aaPredicted RBP12.85□□□□□ -0.35
PHF1-210ENST00000488767 SLC25A45Q8N413 288 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 SLC25A41Q8N5S1 370 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 CCDC110Q8TBZ0 833 aa12.85□□□□□ -0.35
PHF1-210ENST00000488767 TSACCQ96A04 125 aaPredicted RBP12.85□□□□□ -0.35
PHF1-210ENST00000488767 HIC2Q96JB3 615 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms