RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ADRB3P13945 408 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 NEK3P51956 506 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 TAS2R38P59533 333 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 SPARCL1Q14515 664 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 USP39Q53GS9 565 aaKnown RBP19.41■□□□□ 0.7
CCM2-216ENST00000488727 TAB3Q8N5C8 712 aaPredicted RBP19.41■□□□□ 0.7
CCM2-216ENST00000488727 PDCD6IPQ8WUM4 868 aaKnown RBP19.41■□□□□ 0.7
CCM2-216ENST00000488727 GRAMD1AQ96CP6 724 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 PLCD4Q9BRC7 762 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 MLXIPLQ9NP71 852 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 WSB2Q9NYS7 404 aaPredicted RBP19.41■□□□□ 0.7
CCM2-216ENST00000488727 PCDHB9Q9Y5E1 797 aa19.41■□□□□ 0.7
CCM2-216ENST00000488727 SPINT1O43278 529 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 HRO43593 1189 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 PGLSO95336 258 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 GSTA1P08263 222 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 GSTA2P09210 222 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 TIMP2P16035 220 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 TPSB2P20231 275 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 TAC1P20366 129 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 BCKDHBP21953 392 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 ABL2P42684 1182 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 EFTUD2Q15029 972 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCM2-216ENST00000488727 TPSAB1Q15661 275 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 SLC14A2Q15849 920 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 BRAT1Q6PJG6 821 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 ABCA7Q8IZY2 2146 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 HCAR2Q8TDS4 363 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 SPOCK2Q92563 424 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 ALKBH8Q96BT7 664 aaKnown RBP19.4■□□□□ 0.7
CCM2-216ENST00000488727 LRRC39Q96DD0 335 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 TOE1Q96GM8 510 aaKnown RBP19.4■□□□□ 0.7
CCM2-216ENST00000488727 MLPHQ9BV36 600 aaPredicted RBP19.4■□□□□ 0.7
CCM2-216ENST00000488727 NCKAP1Q9Y2A7 1128 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 CAPN7Q9Y6W3 813 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 CEP192Q8TEP8 1941 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 CACNA1HO95180 2353 aa19.4■□□□□ 0.7
CCM2-216ENST00000488727 PMPCBO75439 489 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 SUN1O94901 812 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 CD6P30203 668 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 MSH2P43246 934 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 ADPRHP54922 357 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 PCSK7Q16549 785 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 UGP2Q16851 508 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 FAXCQ5TGI0 409 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 FBXL19Q6PCT2 694 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 KDELC1Q6UW63 502 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 IGDCC3Q8IVU1 814 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 CNPY4Q8N129 248 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 TRIB3Q96RU7 358 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 PRRX2Q99811 253 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 BTBD1Q9H0C5 482 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 CHKBQ9Y259 395 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 PCDHGA2Q9Y5H1 932 aa19.39■□□□□ 0.7
CCM2-216ENST00000488727 PLRG1O43660 514 aaKnown RBP19.39■□□□□ 0.69
CCM2-216ENST00000488727 LILRB5O75023 590 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 SPAG7O75391 227 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 RPP40O75818 363 aaKnown RBP19.39■□□□□ 0.69
CCM2-216ENST00000488727 ZWINTO95229 277 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 PRKCGP05129 697 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 FOXN2P32314 431 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 SFSWAPQ12872 951 aaKnown RBP19.39■□□□□ 0.69
CCM2-216ENST00000488727 PARP6Q2NL67 630 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 ARMC12Q5T9G4 340 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 KDELC2Q7Z4H8 507 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 TTC7BQ86TV6 843 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 OR14C36Q8NHC7 312 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 PIH1D2Q8WWB5 315 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 GAB3Q8WWW8 586 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 SPACA7Q96KW9 195 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 MRGPRX2Q96LB1 330 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 VPS45Q9NRW7 570 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 GGT7Q9UJ14 662 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 ITM2BQ9Y287 266 aa19.39■□□□□ 0.69
CCM2-216ENST00000488727 A0A1W2PPM1 405 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 TCRBV9S1A1TA0A576 114 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 UPK3BL1B0FP48 263 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 UPK3BL2E5RIL1 263 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 SLC7A4O43246 635 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 OXTRP30559 389 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 MAGEA3P43357 314 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 PDK4Q16654 411 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 SPRED3Q2MJR0 410 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 TRPM8Q7Z2W7 1104 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 SPATA21Q7Z572 469 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 CAND1Q86VP6 1230 aaKnown RBP19.38■□□□□ 0.69
CCM2-216ENST00000488727 KLHDC8BQ8IXV7 354 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 C4orf33Q8N1A6 199 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 SLC44A1Q8WWI5 657 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 SMIM14Q96QK8 99 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 ETNK1Q9HBU6 452 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 SGK2Q9HBY8 427 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 DOCK9Q9BZ29 2069 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 SPAG17Q6Q759 2223 aa19.38■□□□□ 0.69
CCM2-216ENST00000488727 THADAQ6YHU6 1953 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 AREL1O15033 823 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 FAM155BO75949 473 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 CA4P22748 312 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 SCTRP47872 440 aa19.37■□□□□ 0.69
CCM2-216ENST00000488727 WNT3AP56704 352 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms