RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ATP13A3Q9H7F0 1226 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 NMRAL1Q9HBL8 299 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 MAGEE1Q9HCI5 957 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 FKBPLQ9UIM3 349 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 SLC25A13Q9UJS0 675 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 FBXO10Q9UK96 956 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 ANKRD6Q9Y2G4 727 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 SOCS5O75159 536 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 SBK3P0C264 359 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 FGF3P11487 239 aaPredicted RBP20.21■□□□□ 0.83
NECAB3-213ENST00000488489 CRABP2P29373 138 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 STC1P52823 247 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 SETDB1Q15047 1291 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 TAF1BQ53T94 588 aaPredicted RBP20.21■□□□□ 0.83
NECAB3-213ENST00000488489 HECTD2Q5U5R9 776 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 DPY19L3Q6ZPD9 716 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 LYSMD3Q7Z3D4 306 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 C12orf40Q86WS4 652 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.21■□□□□ 0.83
NECAB3-213ENST00000488489 SMARCD2Q92925 531 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 MRPL38Q96DV4 380 aaKnown RBP20.21■□□□□ 0.83
NECAB3-213ENST00000488489 GPR78Q96P69 363 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 CDCA3Q99618 268 aaPredicted RBP20.21■□□□□ 0.83
NECAB3-213ENST00000488489 HACD3Q9P035 362 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 CPSF2Q9P2I0 782 aaKnown RBP20.21■□□□□ 0.83
NECAB3-213ENST00000488489 ZNF711Q9Y462 761 aa20.21■□□□□ 0.83
NECAB3-213ENST00000488489 MTF2Q9Y483 593 aaPredicted RBP20.21■□□□□ 0.83
NECAB3-213ENST00000488489 A0A0J9YYE9 177 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 OTOL1A6NHN0 477 aaPredicted RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 G3V2L1 256 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 TRBC1P01850 177 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 GLRBP48167 497 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 CDKN2DP55273 166 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 DMC1Q14565 340 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 TYSND1Q2T9J0 566 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 GET4Q7L5D6 327 aaPredicted RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 GPR149Q86SP6 731 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 TRIM42Q8IWZ5 723 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 ZNF557Q8N988 423 aaPredicted RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 SLC2A11Q9BYW1 496 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 UNKQ9C0B0 810 aaKnown RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 NPHS2Q9NP85 383 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 IL17CQ9P0M4 197 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 RUVBL2Q9Y230 463 aaKnown RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 VWA7Q9Y334 891 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 HGSO14964 777 aaPredicted RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 STX7O15400 261 aaKnown RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 KIF1CO43896 1103 aaKnown RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 SNNO75324 88 aaPredicted RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 CISD3P0C7P0 127 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 ADH5P11766 374 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 CPA3P15088 417 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 ARSAP15289 507 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 CCNHP51946 323 aaPredicted RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 OCRLQ01968 901 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 SULT2A1Q06520 285 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 MESP2Q0VG99 397 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 PEX6Q13608 980 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 AFTPHQ6ULP2 937 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 Q6ZVU0 165 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 PIANPQ8IYJ0 282 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 AHI1Q8N157 1196 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 BPIFB1Q8TDL5 484 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 CYB5D2Q8WUJ1 264 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 MIEF2Q96C03 454 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 NXNL1Q96CM4 212 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 CEP44Q9C0F1 390 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 LRMDAQ9H2I8 198 aa20.2■□□□□ 0.82
NECAB3-213ENST00000488489 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 FNDC3AQ9Y2H6 1198 aaKnown RBP20.2■□□□□ 0.82
NECAB3-213ENST00000488489 TNRC18O15417 2968 aaPredicted RBP20.19■□□□□ 0.82
NECAB3-213ENST00000488489 TK2O00142 265 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 IL1BP01584 269 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 OGNP20774 298 aaKnown RBP20.19■□□□□ 0.82
NECAB3-213ENST00000488489 SERPINA4P29622 427 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 HNF1BP35680 557 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 HMGCLP35914 325 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 SLC12A2P55011 1212 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 RPL26P61254 145 aaKnown RBP20.19■□□□□ 0.82
NECAB3-213ENST00000488489 TIAL1Q01085 375 aaKnown RBP eCLIP20.19■□□□□ 0.824e-7■□□□□ 8
NECAB3-213ENST00000488489 HYAL1Q12794 435 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 CARD16Q5EG05 197 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 ATG16L1Q676U5 607 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 SYCE2Q6PIF2 218 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 ATG14Q6ZNE5 492 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 PCDH20Q8N6Y1 951 aaKnown RBP20.19■□□□□ 0.82
NECAB3-213ENST00000488489 CHST14Q8NCH0 376 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 RAB3IL1Q8TBN0 382 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 ERP27Q96DN0 273 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 MRGPRX3Q96LB0 322 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 EBF3Q9H4W6 596 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 DZANK1Q9NVP4 752 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 RPL26L1Q9UNX3 145 aaKnown RBP20.19■□□□□ 0.82
NECAB3-213ENST00000488489 ERVW-1Q9UQF0 538 aa20.19■□□□□ 0.82
NECAB3-213ENST00000488489 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.18■□□□□ 0.82
NECAB3-213ENST00000488489 DCTN3O75935 186 aa20.18■□□□□ 0.82
NECAB3-213ENST00000488489 COL6A2P12110 1019 aa20.18■□□□□ 0.82
NECAB3-213ENST00000488489 POLR2EP19388 210 aaKnown RBP20.18■□□□□ 0.82
NECAB3-213ENST00000488489 PMLP29590 882 aa20.18■□□□□ 0.82
NECAB3-213ENST00000488489 MC4RP32245 332 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms