RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TMED1Q13445 227 aa11.81□□□□□ -0.52
TRA2B-214ENST00000487615 PGS1Q32NB8 556 aa11.81□□□□□ -0.52
TRA2B-214ENST00000487615 FAM98BQ52LJ0 330 aaKnown RBP11.81□□□□□ -0.52
TRA2B-214ENST00000487615 FAM151BQ6UXP7 276 aa11.81□□□□□ -0.52
TRA2B-214ENST00000487615 LINGO4Q6UY18 593 aa11.81□□□□□ -0.52
TRA2B-214ENST00000487615 MIEF2Q96C03 454 aa11.81□□□□□ -0.52
TRA2B-214ENST00000487615 SPATA16Q9BXB7 569 aa11.81□□□□□ -0.52
TRA2B-214ENST00000487615 SLC2A6Q9UGQ3 507 aa11.81□□□□□ -0.52
TRA2B-214ENST00000487615 QSER1Q2KHR3 1735 aa11.81□□□□□ -0.52
TRA2B-214ENST00000487615 AOC1P19801 751 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 MAGEA6P43360 314 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ACTR3P61158 418 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 OCA2Q04671 838 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 NRF1Q16656 503 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 CLEC6AQ6EIG7 209 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 C17orf99Q6UX52 265 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 DNAJB14Q8TBM8 379 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ABTB1Q969K4 478 aaPredicted RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 PLD4Q96BZ4 506 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 SPG21Q9NZD8 308 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 SPASTQ9UBP0 616 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 BHMG1C9JSJ3 638 aaPredicted RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 OTCP00480 354 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 FGF3P11487 239 aaPredicted RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 CYP2A6P11509 494 aaPredicted RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 EPB42P16452 691 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 IFNA8P32881 189 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 RPS24P62847 133 aaKnown RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 TNFAIP8L3Q5GJ75 292 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ADCK2Q7Z695 626 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 HORMAD1Q86X24 394 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 TP53INP2Q8IXH6 220 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 NPWQ8N729 165 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 RNF145Q96MT1 663 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ZNF599Q96NL3 588 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 FCRL3Q96P31 734 aaPredicted RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 PTPN18Q99952 460 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 CORO1BQ9BR76 489 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 C9orf16Q9BUW7 83 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 PLK2Q9NYY3 685 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 A0A0J9YYE9 177 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 BBIP1A8MTZ0 92 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ARVCFO00192 962 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 VCLP18206 1134 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ATP6V1B2P21281 511 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 PBLDP30039 288 aaPredicted RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 MS4A13Q5J8X5 152 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 LYPLAL1Q5VWZ2 237 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 CERS6Q6ZMG9 384 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ZNF280BQ86YH2 543 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 UCMAQ8WVF2 138 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 VPS33AQ96AX1 596 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 PTCD3Q96EY7 689 aaKnown RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 HIC2Q96JB3 615 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 DHRS4Q9BTZ2 278 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 FAM192AQ9GZU8 254 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 MFSD1Q9H3U5 465 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 CCSER2Q9H7U1 834 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 FLRT1Q9NZU1 646 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 POMPQ9Y244 141 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 TBC1D30Q9Y2I9 924 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 NPEPPSL1A6NEC2 478 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ZBTB14O43829 449 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 DLX3O60479 287 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ADH1AP07327 375 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 FGFR3P22607 806 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 GCAP28676 217 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 MAGEA11P43364 429 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 PLD6Q8N2A8 252 aaKnown RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 OLIG1Q8TAK6 271 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 TWIST2Q8WVJ9 160 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 FIG4Q92562 907 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 PPP3R2Q96LZ3 170 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 ZFYVE1Q9HBF4 777 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 MTMR10Q9NXD2 777 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 STK39Q9UEW8 545 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 FAM32AQ9Y421 112 aaKnown RBP11.8□□□□□ -0.52
TRA2B-214ENST00000487615 PCDHB1Q9Y5F3 818 aa11.8□□□□□ -0.52
TRA2B-214ENST00000487615 CCDC162PA2VCL2 907 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 OR51F1A6NGY5 319 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 ULK1O75385 1050 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 PAX7P23759 505 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 NIPAL4Q0D2K0 466 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 LCP2Q13094 533 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 GPR17Q13304 367 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 PDK3Q15120 406 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 LPCAT4Q643R3 524 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 ERAP2Q6P179 960 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 TAGAPQ8N103 731 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 LINC01465Q8N7H1 131 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 PGAP3Q96FM1 320 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 RMND5BQ96G75 393 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 C1orf50Q9BV19 199 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 EBF2Q9HAK2 575 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 PAPOLBQ9NRJ5 636 aaKnown RBP11.79□□□□□ -0.52
TRA2B-214ENST00000487615 DPP7Q9UHL4 492 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 SQORQ9Y6N5 450 aa11.79□□□□□ -0.52
TRA2B-214ENST00000487615 CITO14578 2027 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms