RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 MMS22LQ6ZRQ5 1243 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 DSELQ8IZU8 1212 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 LNX1Q8TBB1 728 aaPredicted RBP4.12□□□□□ -1.75
LINC00888-204ENST00000487386 PSPC1Q8WXF1 523 aaKnown RBP4.12□□□□□ -1.75
LINC00888-204ENST00000487386 RFFLQ8WZ73 363 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 DNASE2BQ8WZ79 361 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 FIG4Q92562 907 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 PPM1MQ96MI6 270 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 NDST4Q9H3R1 872 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 TMEM30AQ9NV96 361 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 HAO1Q9UJM8 370 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 ERVK-11Q9UQG0 969 aa4.12□□□□□ -1.75
LINC00888-204ENST00000487386 ARID4BQ4LE39 1312 aaPredicted RBP4.12□□□□□ -1.75
LINC00888-204ENST00000487386 NPIPB15A6NHN6 443 aaPredicted RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 CLGNO14967 610 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 NPHP1O15259 732 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 CREB3O43889 395 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 TIPRLO75663 272 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 PIP4K2AP48426 406 aaPredicted RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 HARS2P49590 506 aaKnown RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 OLIG2Q13516 323 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 DRAP1Q14919 205 aaPredicted RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 CDC73Q6P1J9 531 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 UNQ6126/PRO20091Q6UXV3 157 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 SLC36A4Q6YBV0 504 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 KRBA2Q6ZNG9 492 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 PQLC2Q6ZP29 291 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 Q6ZTC4 211 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 R3HCC1LQ7Z5L2 792 aaKnown RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 EXOC3L1Q86VI1 746 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 NR2C2APQ86WQ0 139 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 POC1AQ8NBT0 407 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 NAXEQ8NCW5 288 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 SPATA20Q8TB22 786 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 GTF3C6Q969F1 213 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 TMEM19Q96HH6 336 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 SEC62Q99442 399 aaKnown RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 STRA6Q9BX79 667 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 C1QTNF5Q9BXJ0 243 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 IFIH1Q9BYX4 1025 aaKnown RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 EVA1AQ9H8M9 152 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 ZNF112Q9UJU3 913 aa4.11□□□□□ -1.75
LINC00888-204ENST00000487386 TTC7AQ9ULT0 858 aaPredicted RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 AAR2Q9Y312 384 aaKnown RBP4.11□□□□□ -1.75
LINC00888-204ENST00000487386 A0A0G2JPF8 293 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 FAM237AA0A1B0GTK4 181 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 CCDC189A1A4V9 331 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 HNRNPCL3B7ZW38 293 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 AKR1B15C9JRZ8 316 aaPredicted RBP4.1□□□□□ -1.75
LINC00888-204ENST00000487386 SNAP23O00161 211 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 BUB3O43684 328 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 HNRNPCL1O60812 293 aaKnown RBP4.1□□□□□ -1.75
LINC00888-204ENST00000487386 SEC14L2O76054 403 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 HNRNPCL4P0DMR1 293 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 S1PR1P21453 382 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 RRM1P23921 792 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 MCM3P25205 808 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 CLCNKAP51800 687 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 CTF1Q16619 201 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 HSP90AB4PQ58FF6 505 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 CXorf66Q5JRM2 361 aaPredicted RBP4.1□□□□□ -1.75
LINC00888-204ENST00000487386 KCTD18Q6PI47 426 aaPredicted RBP4.1□□□□□ -1.75
LINC00888-204ENST00000487386 GFRALQ6UXV0 394 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 ZNF34Q8IZ26 560 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 MUC20Q8N307 709 aaPredicted RBP4.1□□□□□ -1.75
LINC00888-204ENST00000487386 PCYOX1LQ8NBM8 494 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 OR2AK2Q8NG84 335 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 METTL6Q8TCB7 284 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 NEK9Q8TD19 979 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 PIP5K1AQ99755 562 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 KIF9Q9HAQ2 790 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 SCPEP1Q9HB40 452 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 LTB4R2Q9NPC1 389 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 KLHL1Q9NR64 748 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 DONSONQ9NYP3 566 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 MKLN1Q9UL63 735 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 KCNS2Q9ULS6 477 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 ICAM5Q9UMF0 924 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 PDS5AQ29RF7 1337 aaKnown RBP4.1□□□□□ -1.75
LINC00888-204ENST00000487386 SCN5AQ14524 2016 aa4.1□□□□□ -1.75
LINC00888-204ENST00000487386 DOCK7Q96N67 2140 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 A0A087WYN8 130 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 A0A1W2PPH5 198 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 A0A1W2PRG0 241 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 BMPR1BO00238 502 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 PAGE4O60829 102 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 ZNF432O94892 652 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 HLA-DOBP13765 273 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 BDKRB2P30411 391 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 RGS2P41220 211 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 NLRP5P59047 1200 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 RPL7AP62424 266 aaKnown RBP4.09□□□□□ -1.75
LINC00888-204ENST00000487386 SLC20A2Q08357 652 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 ARL16Q0P5N6 197 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 TROAPQ12815 778 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 G3BP1Q13283 466 aaKnown RBP eCLIP4.09□□□□□ -1.75
LINC00888-204ENST00000487386 CCNG2Q16589 344 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 KCNT1Q5JUK3 1230 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 SMIM29Q86T20 159 aa4.09□□□□□ -1.75
LINC00888-204ENST00000487386 C1orf87Q8N0U7 546 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms