RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 FAM95CA0A1B0GW59 222 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 CCDC162PA2VCL2 907 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 C2orf81A6NN90 581 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 EBAG9O00559 213 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 CCL22O00626 93 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 TRAFD1O14545 582 aaPredicted RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 AURKAO14965 403 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 BNIP3LO60238 219 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 GSRP00390 522 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 HLA-EP13747 358 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 NNMTP40261 264 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 VASPP50552 380 aaPredicted RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 ST8SIA6P61647 398 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 SNRPD1P62314 119 aaKnown RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 PTPRCAPQ14761 206 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 DBN1Q16643 649 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 FNDC3BQ53EP0 1204 aaKnown RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 PPM1JQ5JR12 505 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 ARMC12Q5T9G4 340 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 PTAR1Q7Z6K3 402 aaPredicted RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 CACNA2D3Q8IZS8 1091 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 PCDH20Q8N6Y1 951 aaKnown RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 ARMC2Q8NEN0 867 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 OR6K2Q8NGY2 324 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 PDCD6IPQ8WUM4 868 aaKnown RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 PIH1D2Q8WWB5 315 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 VOPP1Q96AW1 172 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 MSANTD3Q96H12 275 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 CDKN2AIPNLQ96HQ2 116 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 SEC16BQ96JE7 1060 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 SMIM14Q96QK8 99 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 ACOX2Q99424 681 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 CD320Q9NPF0 282 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 MARCH4Q9P2E8 410 aaPredicted RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 THAP10Q9P2Z0 257 aaPredicted RBP14.19□□□□□ -0.14
CUX1-209ENST00000487284 SLC39A10Q9ULF5 831 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 ANKRD6Q9Y2G4 727 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 STARD13Q9Y3M8 1113 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 PCDHB9Q9Y5E1 797 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 PLXNB3Q9ULL4 1909 aa14.19□□□□□ -0.14
CUX1-209ENST00000487284 WASH3PC4AMC7 463 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 KLF11O14901 512 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 BIRC5O15392 142 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 BUD23O43709 281 aaKnown RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 SNX3O60493 162 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 PLIN3O60664 434 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 EDF1O60869 148 aaKnown RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 HAUS5O94927 633 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 S1PR4O95977 384 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 GOT2P00505 430 aaKnown RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 C2P06681 752 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 OGNP20774 298 aaKnown RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 DRD1P21728 446 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 LPOP22079 712 aaPredicted RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 SLC8A1P32418 973 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 IL12RB1P42701 662 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 TNFRSF4P43489 277 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 CLCN5P51795 746 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 SEC13P55735 322 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 BCL2L1Q07817 233 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 USP10Q14694 798 aaKnown RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 N4BP2L1Q5TBK1 243 aaPredicted RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 CGB2Q6NT52 195 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 CNSTQ6PJW8 725 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 LCA5Q86VQ0 697 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 SPATS2Q86XZ4 545 aaKnown RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 CAMK1DQ8IU85 385 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 ZNF513Q8N8E2 541 aaPredicted RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 KDM1BQ8NB78 822 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 SCG3Q8WXD2 468 aaKnown RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 FAM3CQ92520 227 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 GRAMD1AQ96CP6 724 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 TUBGCP5Q96RT8 1024 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 ELAC2Q9BQ52 826 aaKnown RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 ATP13A3Q9H7F0 1226 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 SUDS3Q9H7L9 328 aaPredicted RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 MANSC1Q9H8J5 431 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 MAGEE1Q9HCI5 957 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 ARHGEF3Q9NR81 526 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 FBXO6Q9NRD1 293 aaPredicted RBP14.18□□□□□ -0.14
CUX1-209ENST00000487284 CACNA2D2Q9NY47 1150 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 SIRPGQ9P1W8 387 aa14.18□□□□□ -0.14
CUX1-209ENST00000487284 WDR91A4D1P6 747 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 OR51F1A6NGY5 319 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 CD3EAPO15446 510 aaKnown RBP14.17□□□□□ -0.14
CUX1-209ENST00000487284 PIGNO95427 931 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 IL1BP01584 269 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 PROCP04070 461 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 CHRM1P11229 460 aaPredicted RBP14.17□□□□□ -0.14
CUX1-209ENST00000487284 SERPINA4P29622 427 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 GKP32189 559 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 TIE1P35590 1138 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 KIR2DL1P43626 348 aaPredicted RBP14.17□□□□□ -0.14
CUX1-209ENST00000487284 CCNHP51946 323 aaPredicted RBP14.17□□□□□ -0.14
CUX1-209ENST00000487284 EPHB1P54762 984 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 RAB10P61026 200 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 TMPRSS15P98073 1019 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 POU4F1Q01851 419 aa14.17□□□□□ -0.14
CUX1-209ENST00000487284 GRSF1Q12849 480 aaKnown RBP eCLIP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms