RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PKP2Q99959 881 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 COPS7BQ9H9Q2 264 aaPredicted RBP26.11■■□□□ 1.77
HLA-C-208ENST00000487245 POPDC3Q9HBV1 291 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 TNFRSF12AQ9NP84 129 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 SEPT3Q9UH03 358 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 TRAF6Q9Y4K3 522 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 NDST3O95803 873 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 SMIM18P0DKX4 95 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 OGNP20774 298 aaKnown RBP26.11■■□□□ 1.77
HLA-C-208ENST00000487245 GSTT1P30711 240 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 TUFMP49411 452 aaKnown RBP26.11■■□□□ 1.77
HLA-C-208ENST00000487245 ACADVLP49748 655 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 GATMP50440 423 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 CDH4P55283 916 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 GNA12Q03113 381 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 IRAK1BP1Q5VVH5 260 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 C8orf82Q6P1X6 216 aaPredicted RBP26.11■■□□□ 1.77
HLA-C-208ENST00000487245 AHI1Q8N157 1196 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 RIN3Q8TB24 985 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 TBATAQ96M53 351 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 SLC25A23Q9BV35 468 aa26.11■■□□□ 1.77
HLA-C-208ENST00000487245 FBP2O00757 339 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 CD3EAPO15446 510 aaKnown RBP26.1■■□□□ 1.77
HLA-C-208ENST00000487245 INHAP05111 366 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 KCNQ1P51787 676 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 CREB5Q02930 508 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 GPNMBQ14956 572 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 C11orf91Q3C1V1 193 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 ZNF678Q5SXM1 525 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 MYEOVQ96EZ4 313 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 ASB2Q96Q27 587 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 MGME1Q9BQP7 344 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 MARCH4Q9P2E8 410 aaPredicted RBP26.1■■□□□ 1.77
HLA-C-208ENST00000487245 COMMD3-BMI1R4GMX3 469 aa26.1■■□□□ 1.77
HLA-C-208ENST00000487245 AOC2O75106 756 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 SNRPB2P08579 225 aaKnown RBP26.09■■□□□ 1.77
HLA-C-208ENST00000487245 FDXRP22570 491 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 PMLP29590 882 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 CDKN2DP55273 166 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 SH3BGRP55822 239 aaPredicted RBP26.09■■□□□ 1.77
HLA-C-208ENST00000487245 PDAP1Q13442 181 aaKnown RBP26.09■■□□□ 1.77
HLA-C-208ENST00000487245 KLHDC10Q6PID8 442 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 TMEM207Q6UWW9 146 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 LARP4Q71RC2 724 aaKnown RBP eCLIP26.09■■□□□ 1.774e-7■■■□□ 14.7
HLA-C-208ENST00000487245 ISCA2Q86U28 154 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 BLOC1S5Q8TDH9 187 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 KCTD3Q9Y597 815 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 AP4B1Q9Y6B7 739 aa26.09■■□□□ 1.77
HLA-C-208ENST00000487245 MUSKO15146 869 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 GPC4O75487 556 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 GOT2P00505 430 aaKnown RBP26.08■■□□□ 1.77
HLA-C-208ENST00000487245 CES1P23141 567 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 MSX2P35548 267 aaPredicted RBP26.08■■□□□ 1.77
HLA-C-208ENST00000487245 SUOXP51687 545 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 USP41Q3LFD5 358 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 AGKQ53H12 422 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 SPATA24Q86W54 205 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 RNF148Q8N7C7 305 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 FBXO22Q8NEZ5 403 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 ZNF696Q9H7X3 374 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 ADA2Q9NZK5 511 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 CD300AQ9UGN4 299 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 E7ENX8 843 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 ATF6P18850 670 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 HOXD9P28356 352 aaPredicted RBP26.08■■□□□ 1.77
HLA-C-208ENST00000487245 UNC50Q53HI1 259 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 PLD4Q96BZ4 506 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 DNAJC1Q96KC8 554 aaKnown RBP26.08■■□□□ 1.77
HLA-C-208ENST00000487245 UBAP1Q9NZ09 502 aa26.08■■□□□ 1.77
HLA-C-208ENST00000487245 UBA2Q9UBT2 640 aaPredicted RBP26.08■■□□□ 1.77
HLA-C-208ENST00000487245 ARIH1Q9Y4X5 557 aaPredicted RBP26.08■■□□□ 1.77
HLA-C-208ENST00000487245 TBKBP1A7MCY6 615 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 PITPNM1O00562 1244 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 UBFD1O14562 309 aaKnown RBP26.07■■□□□ 1.76
HLA-C-208ENST00000487245 KDELR3O43731 214 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 CLDN11O75508 207 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 RNASEH2AO75792 299 aaKnown RBP26.07■■□□□ 1.76
HLA-C-208ENST00000487245 RHDQ02161 417 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 IL31Q6EBC2 164 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 CFAP52Q8N1V2 620 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 SLAIN1Q8ND83 568 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 OR4L1Q8NH43 312 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 PSKH2Q96QS6 385 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 CINPQ9BW66 212 aaPredicted RBP26.07■■□□□ 1.76
HLA-C-208ENST00000487245 NACA2Q9H009 215 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 SPAG4Q9NPE6 437 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 CATSPERZQ9NTU4 200 aa26.07■■□□□ 1.76
HLA-C-208ENST00000487245 INTS10Q9NVR2 710 aaKnown RBP26.07■■□□□ 1.76
HLA-C-208ENST00000487245 CCDC162PA2VCL2 907 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 OR51F1A6NGY5 319 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 NT5C1B-RDH14C9J2C7 533 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 FGF4P08620 206 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 SLC6A4P31645 630 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 OXCT1P55809 520 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 HERVK_113P63132 956 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 DYNC1I2Q13409 638 aaKnown RBP26.06■■□□□ 1.76
HLA-C-208ENST00000487245 HECTD3Q5T447 861 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 GPR158Q5T848 1215 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 SLC8B1Q6J4K2 584 aa26.06■■□□□ 1.76
HLA-C-208ENST00000487245 CYHR1Q6ZMK1 362 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms