RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 N4BP2L1Q5TBK1 243 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TRIM68Q6AZZ1 485 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 FAM45BPQ6NSW5 357 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CNSTQ6PJW8 725 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 GDPD4Q6W3E5 623 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CDHR3Q6ZTQ4 885 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 USP45Q70EL2 814 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CMC1Q7Z7K0 106 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 NUDCD3Q8IVD9 361 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 SLC41A1Q8IVJ1 513 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TNS4Q8IZW8 715 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TTC30BQ8N4P2 665 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 GPATCH11Q8N954 259 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 KDM1BQ8NB78 822 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CCDC197Q8NCU1 140 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 OR6K2Q8NGY2 324 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 PPP1R14CQ8TAE6 165 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TTC8Q8TAM2 541 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 FAM45AQ8TCE6 357 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 UCMAQ8WVF2 138 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 PIH1D2Q8WWB5 315 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 LRIG1Q96JA1 1093 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 LRRC3BQ96PB8 259 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 KCNK17Q96T54 332 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 TTC1Q99614 292 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 FAM83CQ9BQN1 747 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 HEPHQ9BQS7 1158 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 PLCD4Q9BRC7 762 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 OSBPL1AQ9BXW6 950 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CIPCQ9C0C6 399 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CCDC68Q9H2F9 335 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 EBF3Q9H4W6 596 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 ZNF576Q9H609 170 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 MANSC1Q9H8J5 431 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 ECT2Q9H8V3 914 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 CAB39LQ9H9S4 337 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 ZFYVE1Q9HBF4 777 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 APPL1Q9UKG1 709 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 PRDM4Q9UKN5 801 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 PLA2G4CQ9UP65 541 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 SLC30A1Q9Y6M5 507 aa7.05□□□□□ -1.28
SF3A3-206ENST00000487062 MKI67P46013 3256 aaKnown RBP7.05□□□□□ -1.28
SF3A3-206ENST00000487062 C1orf232A0A0U1RR37 186 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ANKRD33BA6NCL7 494 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 OR51F1A6NGY5 319 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 CAPN8A6NHC0 703 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 GOLGA8CPA6NN73 597 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 CCL22O00626 93 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 KLF11O14901 512 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 AURKAO14965 403 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 LZTS3O60299 673 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 EDF1O60869 148 aaKnown RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 S1PR4O95977 384 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 PROCP04070 461 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 UGT2B4P06133 528 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 BPGMP07738 259 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 TROVE2P10155 538 aaKnown RBP eCLIP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 CYP2A6P11509 494 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 PSMC3P17980 439 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 FCARP24071 287 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 GABRB3P28472 473 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ALDH3A1P30838 453 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 MC4RP32245 332 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 EIF2DP41214 584 aaKnown RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ABCG1P45844 678 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 STC1P52823 247 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 PRKAA2P54646 552 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 FCHO2Q0JRZ9 810 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ASPHQ12797 758 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 RUNX3Q13761 415 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ITIH4Q14624 930 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 PTPRCAPQ14761 206 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ZKSCAN8Q15776 578 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 FAM83EQ2M2I3 478 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 TYSND1Q2T9J0 566 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ZRANB3Q5FWF4 1079 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 PPM1JQ5JR12 505 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 HECTD2Q5U5R9 776 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 LYPLAL1Q5VWZ2 237 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 TANGO2Q6ICL3 276 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 KLC3Q6P597 504 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 BRAT1Q6PJG6 821 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 VITQ6UXI7 678 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 CERS6Q6ZMG9 384 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 DPY19L3Q6ZPD9 716 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 EP400NLQ6ZTU2 488 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 TPRG1Q6ZUI0 275 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 Q6ZVU0 165 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 MTSS1LQ765P7 747 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 LYSMD3Q7Z3D4 306 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 PIGWQ7Z7B1 504 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 CLEC14AQ86T13 490 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 TBC1D1Q86TI0 1168 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ETFBKMTQ8IXQ9 262 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 STK40Q8N2I9 435 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 RDH11Q8TC12 318 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 HCAR2Q8TDS4 363 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ELSPBP1Q96BH3 223 aa7.04□□□□□ -1.28
SF3A3-206ENST00000487062 ECHDC3Q96DC8 303 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms