RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 XKR4Q5GH76 650 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 TMTC4Q5T4D3 741 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 RNF187Q5TA31 235 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 SLC8B1Q6J4K2 584 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 CD300LGQ6UXG3 332 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 ALKAL1Q6UXT8 129 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 MAEAQ7L5Y9 396 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 KCTD20Q7Z5Y7 419 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 LIX1LQ8IVB5 337 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 DIS3L2Q8IYB7 885 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 TCEAL8Q8IYN2 117 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 RBMXL3Q8N7X1 1067 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 ERMNQ8TAM6 284 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 DEPTORQ8TB45 409 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 NSMCE1Q8WV22 266 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 DNASE1L2Q92874 299 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 SECISBP2LQ93073 1101 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 ELSPBP1Q96BH3 223 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 MCRS1Q96EZ8 462 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 PPP1R10Q96QC0 940 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 KXD1Q9BQD3 176 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 PLA2G2FQ9BZM2 168 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 MS4A7Q9GZW8 240 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 CXCL16Q9H2A7 254 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 ZFP14Q9HCL3 533 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 TRPV5Q9NQA5 729 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 PRMT8Q9NR22 394 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 SLC38A7Q9NVC3 462 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 HCFC1R1Q9NWW0 138 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 MAFFQ9ULX9 164 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 DRG1Q9Y295 367 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 GDAQ9Y2T3 454 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 CDY1Q9Y6F8 540 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 TICRRQ7Z2Z1 1910 aa4.28□□□□□ -1.72
SNRNP40-205ENST00000486941 ZNF638Q14966 1978 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 PHLPP2Q6ZVD8 1323 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 DENND4CQ5VZ89 1909 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 DNAH14Q0VDD8 3507 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 ARHGEF35A5YM69 484 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 SHISA7A6NL88 538 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 H7C4K7 107 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 K7ERI5 159 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 AGPSO00116 658 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 GTPBP1O00178 669 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 BTN3A1O00481 513 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 CES2O00748 559 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 SYN3O14994 580 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 LRP3O75074 770 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 CNOT3O75175 753 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TOMM40O96008 361 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 EDN1P05305 212 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 CBSLP0DN79 551 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 PF4V1P10720 104 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TDGF1P13385 188 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 KCNE1P15382 129 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 PSMC3P17980 439 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 ELF1P32519 619 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 RPL9P32969 192 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 CBSP35520 551 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 BRCC3P46736 316 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 ROR1Q01973 937 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 ZNF91Q05481 1191 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 MTAPQ13126 283 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TRIM29Q14134 588 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 PDIA5Q14554 519 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 MLC1Q15049 377 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 ME3Q16798 604 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 SLC5A9Q2M3M2 681 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 MGAT5BQ3V5L5 792 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 FAM78AQ5JUQ0 283 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 CYP4A22Q5TCH4 519 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 ATF7IP2Q5U623 682 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TPGS2Q68CL5 300 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TANGO2Q6ICL3 276 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TPRG1Q6ZUI0 275 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 SIRT6Q8N6T7 355 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 LEMD2Q8NC56 503 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 OSR1Q8TAX0 266 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 DNAJB14Q8TBM8 379 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 ING5Q8WYH8 240 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 KIFAP3Q92845 792 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 GTF3C6Q969F1 213 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 C1GALT1C1Q96EU7 318 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 IFT74Q96LB3 600 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 FYTTD1Q96QD9 318 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 RTKNQ9BST9 563 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TRMT61BQ9BVS5 477 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 CCDC94Q9BW85 323 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 GPR88Q9GZN0 384 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TMEM60Q9H2L4 133 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 ZMAT3Q9HA38 289 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 PTPRHQ9HD43 1115 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 PCDH12Q9NPG4 1184 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 HEBP1Q9NRV9 189 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 IP6K2Q9UHH9 426 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 TNFSF13BQ9Y275 285 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 GREB1Q4ZG55 1949 aa4.27□□□□□ -1.73
SNRNP40-205ENST00000486941 COL4A2P08572 1712 aa4.26□□□□□ -1.73
SNRNP40-205ENST00000486941 ANK1P16157 1881 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms