RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 PCDH9Q9HC56 1237 aa12.94□□□□□ -0.34
SSR4-211ENST00000486204 GPR27Q9NS67 375 aa12.94□□□□□ -0.34
SSR4-211ENST00000486204 KCND1Q9NSA2 647 aa12.94□□□□□ -0.34
SSR4-211ENST00000486204 KLHL8Q9P2G9 620 aaPredicted RBP12.94□□□□□ -0.34
SSR4-211ENST00000486204 COQ6Q9Y2Z9 468 aa12.94□□□□□ -0.34
SSR4-211ENST00000486204 HECTD1Q9ULT8 2610 aa12.94□□□□□ -0.34
SSR4-211ENST00000486204 COL5A1P20908 1838 aaPredicted RBP12.94□□□□□ -0.34
SSR4-211ENST00000486204 CFAP69A5D8W1 941 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 FANCGO15287 622 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 KIF5CO60282 957 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 TM7SF2O76062 418 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 FGGP02679 453 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 CTPS1P17812 591 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 CD38P28907 300 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 VIPR1P32241 457 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 HNF1BP35680 557 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 IGFALSP35858 605 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 GRK6P43250 576 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 CLDN2P57739 230 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 RPL26P61254 145 aaKnown RBP12.93□□□□□ -0.34
SSR4-211ENST00000486204 TLE3Q04726 772 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 ANKRD20A2Q5SQ80 823 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 ANKRD20A1Q5TYW2 823 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 ANKRD20A3Q5VUR7 823 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 PID1Q7Z2X4 250 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 ABI3BPQ7Z7G0 1075 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 TSPAN33Q86UF1 283 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 KLHDC8BQ8IXV7 354 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 CBARPQ8N350 705 aaPredicted RBP12.93□□□□□ -0.34
SSR4-211ENST00000486204 RASGEF1CQ8N431 466 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 PAF1Q8N7H5 531 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 MFSD2AQ8NA29 543 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 DENND6BQ8NEG7 585 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 FGF11Q92914 225 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 CENPTQ96BT3 561 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 RTP4Q96DX8 246 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 LENG8Q96PV6 779 aaPredicted RBP12.93□□□□□ -0.34
SSR4-211ENST00000486204 AASDHPPTQ9NRN7 309 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 IGSF5Q9NSI5 407 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 TRHDEQ9UKU6 1024 aa12.93□□□□□ -0.34
SSR4-211ENST00000486204 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
SSR4-211ENST00000486204 ARHGEF17Q96PE2 2063 aaPredicted RBP12.92□□□□□ -0.34
SSR4-211ENST00000486204 A0A0U1RQS6 177 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 POM121BA6NF01 834 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 C5orf60A6NFR6 353 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 A8MX80 341 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 F5H423 210 aaPredicted RBP12.92□□□□□ -0.34
SSR4-211ENST00000486204 SLC28A2O43868 658 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 CEP104O60308 925 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 HEXIM1O94992 359 aaKnown RBP12.92□□□□□ -0.34
SSR4-211ENST00000486204 CA4P22748 312 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 AKT2P31751 481 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 CTSKP43235 329 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 CLDN6P56747 220 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 NXPH1P58417 271 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 RHDQ02161 417 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 TARDBPQ13148 414 aaKnown RBP eCLIP12.92□□□□□ -0.34
SSR4-211ENST00000486204 GALNT3Q14435 633 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 RTP5Q14D33 572 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 TEAD4Q15561 434 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 PCSK7Q16549 785 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 CDKN3Q16667 212 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 QPCTQ16769 361 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 KIF19Q2TAC6 998 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 KYAT3Q6YP21 454 aaKnown RBP12.92□□□□□ -0.34
SSR4-211ENST00000486204 USP45Q70EL2 814 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 IQCHQ86VS3 1027 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 SPATS2Q86XZ4 545 aaKnown RBP12.92□□□□□ -0.34
SSR4-211ENST00000486204 LPCAT1Q8NF37 534 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 CCDC110Q8TBZ0 833 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 C1orf54Q8WWF1 131 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 MRGPRX2Q96LB1 330 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 BMFQ96LC9 184 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 COQ10AQ96MF6 247 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 SPATA13Q96N96 652 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 WDR24Q96S15 920 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 LYSMD1Q96S90 227 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 TMEM121Q9BTD3 319 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 MLPHQ9BV36 600 aaPredicted RBP12.92□□□□□ -0.34
SSR4-211ENST00000486204 FRMD8P1Q9BZ68 369 aaPredicted RBP12.92□□□□□ -0.34
SSR4-211ENST00000486204 SEMA4CQ9C0C4 833 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 NRSN2Q9GZP1 204 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 MBNL1Q9NR56 388 aaKnown RBP12.92□□□□□ -0.34
SSR4-211ENST00000486204 UBP1Q9NZI7 540 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 FTSJ1Q9UET6 329 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 RSPH14Q9UHP6 348 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 ANKRD6Q9Y2G4 727 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 SNX11Q9Y5W9 270 aa12.92□□□□□ -0.34
SSR4-211ENST00000486204 ATMQ13315 3056 aa12.91□□□□□ -0.34
SSR4-211ENST00000486204 LOC285095A0A1B0GVY8 99 aa12.91□□□□□ -0.34
SSR4-211ENST00000486204 ANKRD66B4E2M5 251 aa12.91□□□□□ -0.34
SSR4-211ENST00000486204 PSMD11O00231 422 aa12.91□□□□□ -0.34
SSR4-211ENST00000486204 PMPCBO75439 489 aa12.91□□□□□ -0.34
SSR4-211ENST00000486204 ZNF189O75820 626 aaPredicted RBP12.91□□□□□ -0.34
SSR4-211ENST00000486204 RECQL5O94762 991 aaPredicted RBP12.91□□□□□ -0.34
SSR4-211ENST00000486204 ELFN1P0C7U0 828 aa12.91□□□□□ -0.34
SSR4-211ENST00000486204 CYP2A6P11509 494 aaPredicted RBP12.91□□□□□ -0.34
SSR4-211ENST00000486204 PSMB4P28070 264 aa12.91□□□□□ -0.34
SSR4-211ENST00000486204 WNT3AP56704 352 aa12.91□□□□□ -0.34
SSR4-211ENST00000486204 PFN3P60673 137 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms