RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 TRILQ7L0X0 811 aa6.2□□□□□ -1.42
RTN4-214ENST00000486085 PATL1Q86TB9 770 aaKnown RBP6.2□□□□□ -1.42
RTN4-214ENST00000486085 MIGA1Q8NAN2 632 aa6.2□□□□□ -1.42
RTN4-214ENST00000486085 TMEM163Q8TC26 289 aa6.2□□□□□ -1.42
RTN4-214ENST00000486085 RBM38Q9H0Z9 239 aaKnown RBP6.2□□□□□ -1.42
RTN4-214ENST00000486085 PRKRIP1Q9H875 184 aaPredicted RBP6.2□□□□□ -1.42
RTN4-214ENST00000486085 PANK3Q9H999 370 aa6.2□□□□□ -1.42
RTN4-214ENST00000486085 BPIFA1Q9NP55 256 aa6.2□□□□□ -1.42
RTN4-214ENST00000486085 SMYD2Q9NRG4 433 aa6.2□□□□□ -1.42
RTN4-214ENST00000486085 RAI2Q9Y5P3 530 aa6.2□□□□□ -1.42
RTN4-214ENST00000486085 TTC3P53804 2025 aa6.2□□□□□ -1.42
RTN4-214ENST00000486085 A0A0U1RQF3 1178 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 EIF3CLB5ME19 914 aaKnown RBP6.19□□□□□ -1.42
RTN4-214ENST00000486085 USP17L23D6RBM5 183 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 SEC14L5O43304 696 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 ITM2AO43736 263 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 MTA2O94776 668 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 LCATP04180 440 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 ITGAXP20702 1163 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 GNLYP22749 145 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 DCAF7P61962 342 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 FOXD4Q12950 439 aaPredicted RBP6.19□□□□□ -1.42
RTN4-214ENST00000486085 ERV3-1Q14264 604 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 DCAF6Q58WW2 860 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 FNBP1LQ5T0N5 605 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 C4orf50Q6ZRC1 276 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 ASB5Q8WWX0 329 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 SNAPC3Q92966 411 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 GTF3C6Q969F1 213 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 SMARCE1Q969G3 411 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 OTULINQ96BN8 352 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 PERPQ96FX8 193 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 PLEKHA4Q9H4M7 779 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 CYSLTR2Q9NS75 346 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 KNSTRNQ9Y448 316 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 SHPRHQ149N8 1683 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 NFAT5O94916 1531 aa6.19□□□□□ -1.42
RTN4-214ENST00000486085 CPDO75976 1380 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 PNPLA6Q8IY17 1366 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 A0A1B0GVT2 93 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 PI4KAP2A4QPH2 592 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 F5H0A9 414 aaPredicted RBP6.18□□□□□ -1.42
RTN4-214ENST00000486085 KLK8O60259 260 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 ETFAP13804 333 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 MYF6P23409 242 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 NFKBIAP25963 317 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 BSGP35613 385 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 PBX3P40426 434 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 OLR1P78380 273 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 SETQ01105 290 aaPredicted RBP6.18□□□□□ -1.42
RTN4-214ENST00000486085 FRG1Q14331 258 aaKnown RBP6.18□□□□□ -1.42
RTN4-214ENST00000486085 CCNG2Q16589 344 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 COL28A1Q2UY09 1125 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 ZNF260Q3ZCT1 412 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 FSCBQ5H9T9 825 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 DNTTIP2Q5QJE6 756 aaKnown RBP6.18□□□□□ -1.42
RTN4-214ENST00000486085 FBXO46Q6PJ61 603 aaPredicted RBP6.18□□□□□ -1.42
RTN4-214ENST00000486085 TECPR1Q7Z6L1 1165 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 PXKQ7Z7A4 578 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 SFTPA2Q8IWL1 248 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 NGEFQ8N5V2 710 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 INTS12Q96CB8 462 aaKnown RBP6.18□□□□□ -1.42
RTN4-214ENST00000486085 FBXL8Q96CD0 374 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 MAGEE1Q9HCI5 957 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 SLC6A13Q9NSD5 602 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 DIAPH3Q9NSV4 1193 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 LIMA1Q9UHB6 759 aaKnown RBP6.18□□□□□ -1.42
RTN4-214ENST00000486085 HAO1Q9UJM8 370 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 KCNE2Q9Y6J6 123 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 RTL1A6NKG5 1358 aa6.18□□□□□ -1.42
RTN4-214ENST00000486085 TAF4O00268 1085 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 RGS14O43566 566 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 SPRY3O43610 288 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 RNASEH2AO75792 299 aaKnown RBP6.17□□□□□ -1.42
RTN4-214ENST00000486085 DDX58O95786 925 aaKnown RBP6.17□□□□□ -1.42
RTN4-214ENST00000486085 NAGAP17050 411 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 SCP2P22307 547 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 PSMA4P25789 261 aaKnown RBP6.17□□□□□ -1.42
RTN4-214ENST00000486085 SHMT1P34896 483 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 GPS2Q13227 327 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 FGFBP1Q14512 234 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 HNF4GQ14541 408 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 TCTN1Q2MV58 587 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 ALG11Q2TAA5 492 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 HYIQ5T013 277 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 SNX30Q5VWJ9 437 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 DAB2IPQ5VWQ8 1189 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 TSSK4Q6SA08 328 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 LCTLQ6UWM7 567 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 ARRDC2Q8TBH0 407 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 PSPC1Q8WXF1 523 aaKnown RBP6.17□□□□□ -1.42
RTN4-214ENST00000486085 LRRC59Q96AG4 307 aaKnown RBP6.17□□□□□ -1.42
RTN4-214ENST00000486085 ZNF570Q96NI8 536 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 CHCHD6Q9BRQ6 235 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 TKTL2Q9H0I9 626 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 KIF9Q9HAQ2 790 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 CLK4Q9HAZ1 481 aaKnown RBP6.17□□□□□ -1.42
RTN4-214ENST00000486085 BLOC1S4Q9NUP1 217 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 TMEM51Q9NW97 253 aa6.17□□□□□ -1.42
RTN4-214ENST00000486085 CISD1Q9NZ45 108 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms