RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 BUD23O43709 281 aaKnown RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 PIAS1O75925 651 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 CRTAMO95727 393 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 C1SP09871 688 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 LPOP22079 712 aaPredicted RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 STX2P32856 288 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 HMGCLP35914 325 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 PSMD8P48556 350 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 RPS14P62263 151 aaKnown RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 LAMB3Q13751 1172 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 GAS6Q14393 721 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 CST6Q15828 149 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 POM121L1PQ3SYA9 428 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 KBTBD12Q3ZCT8 623 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 LRRC73Q5JTD7 316 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 PIP5KL1Q5T9C9 394 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 Q6ZS52 159 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 USP45Q70EL2 814 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 MARK2Q7KZI7 788 aaKnown RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 DPPA4Q7L190 304 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 DSG4Q86SJ6 1040 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 TSPAN33Q86UF1 283 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 MMAAQ8IVH4 418 aaKnown RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 CBARPQ8N350 705 aaPredicted RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 AADATQ8N5Z0 425 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 DNAJC1Q96KC8 554 aaKnown RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 SRPK1Q96SB4 655 aaKnown RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 HDAC8Q9BY41 377 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 MKRN2Q9H000 416 aaKnown RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 CCDC134Q9H6E4 229 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 FBRSQ9HAH7 460 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 PCDH12Q9NPG4 1184 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 NLE1Q9NVX2 485 aaPredicted RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 POLR3BQ9NW08 1133 aaPredicted RBP11.32□□□□□ -0.6
SND1-212ENST00000485871 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 B4GALT6Q9UBX8 382 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 SLC24A2Q9UI40 661 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 CACNA1HO95180 2353 aa11.32□□□□□ -0.6
SND1-212ENST00000485871 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 EML5Q05BV3 1969 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 KANSL1LA0AUZ9 987 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 PRR23AA6NEV1 266 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 PLK4O00444 970 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 GAPDHSO14556 408 aaPredicted RBP11.31□□□□□ -0.6
SND1-212ENST00000485871 NDUFAB1O14561 156 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 MID1O15344 667 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 SLC7A4O43246 635 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 RPP40O75818 363 aaKnown RBP11.31□□□□□ -0.6
SND1-212ENST00000485871 CLDN7O95471 211 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 FAM107AO95990 144 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 IL1BP01584 269 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 ADRB3P13945 408 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 GM2AP17900 193 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 VIPR1P32241 457 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 MMP12P39900 470 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 NEK3P51956 506 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 STC1P52823 247 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 NUBP1P53384 320 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 TAS2R38P59533 333 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 POLR2LP62875 67 aaKnown RBP11.31□□□□□ -0.6
SND1-212ENST00000485871 XIAPP98170 497 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 GUCY1A3Q02108 690 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 SEMG2Q02383 582 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 PTSQ03393 145 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 MGAT5Q09328 741 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 LONRF1Q17RB8 773 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 KLHL38Q2WGJ6 581 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 EOGTQ5NDL2 527 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 TEDDM1Q5T9Z0 273 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 LRRC66Q68CR7 880 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 ZNF776Q68DI1 518 aaPredicted RBP11.31□□□□□ -0.6
SND1-212ENST00000485871 ERN2Q76MJ5 926 aaKnown RBP11.31□□□□□ -0.6
SND1-212ENST00000485871 CNTN4Q8IWV2 1026 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 NDUFAF2Q8N183 169 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 SYNPOQ8N3V7 929 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 OR4K2Q8NGD2 314 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 EPS8L3Q8TE67 593 aaKnown RBP11.31□□□□□ -0.6
SND1-212ENST00000485871 SLC44A1Q8WWI5 657 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 ZBTB9Q96C00 473 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 ERLEC1Q96DZ1 483 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 CDKN2AIPNLQ96HQ2 116 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 TBATAQ96M53 351 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 MCMBPQ9BTE3 642 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 ZFYVE1Q9HBF4 777 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 SLC17A6Q9P2U8 582 aa11.31□□□□□ -0.6
SND1-212ENST00000485871 C1orf232A0A0U1RR37 186 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 EXOC1LA0A1B0GW35 172 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 CCDC162PA2VCL2 907 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 GMNCA6NCL1 334 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 OR51F1A6NGY5 319 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 C2orf81A6NN90 581 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 CCL22O00626 93 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
SND1-212ENST00000485871 SYNCRIPO60506 623 aaKnown RBP11.3□□□□□ -0.6
SND1-212ENST00000485871 UGT1A9O60656 530 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 VAPBO95292 243 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 ADH1BP00325 375 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 ERVK-10P10266 1014 aa11.3□□□□□ -0.6
SND1-212ENST00000485871 ZNF30P17039 623 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms