RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 TMPRSS15P98073 1019 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 PDE1CQ14123 709 aaPredicted RBP11.87□□□□□ -0.51
APTX-227ENST00000485479 PPP1R7Q15435 360 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 DUOXA1Q1HG43 343 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 PRR23CQ6ZRP0 262 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 Q6ZSR6 202 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 SPATS2Q86XZ4 545 aaKnown RBP11.87□□□□□ -0.51
APTX-227ENST00000485479 NAT14Q8WUY8 206 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 DTD2Q96FN9 168 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 LGR4Q9BXB1 951 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 HOMER3Q9NSC5 361 aa11.87□□□□□ -0.51
APTX-227ENST00000485479 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
APTX-227ENST00000485479 INPP4BO15327 924 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 SDC3O75056 442 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 AVILO75366 819 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 ZNF806P0C7X5 589 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 HLA-DPA1P20036 260 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 DEKP35659 375 aaKnown RBP11.86□□□□□ -0.51
APTX-227ENST00000485479 FNTAP49354 379 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 SUOXP51687 545 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 STC1P52823 247 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 RPL26P61254 145 aaKnown RBP11.86□□□□□ -0.51
APTX-227ENST00000485479 SEMA5AQ13591 1074 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 SEPT6Q14141 434 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 SLC14A2Q15849 920 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 AASDHQ4L235 1098 aaPredicted RBP11.86□□□□□ -0.51
APTX-227ENST00000485479 CERCAMQ5T4B2 595 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 RAET1GQ6H3X3 334 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 SLC23A3Q6PIS1 610 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 NDUFAF2Q8N183 169 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 DNAAF3Q8N9W5 541 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 GPR26Q8NDV2 337 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 SPATA4Q8NEY3 305 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 OR13C4Q8NGS5 318 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
APTX-227ENST00000485479 EDEM2Q9BV94 578 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 RIOK2Q9BVS4 552 aaKnown RBP11.86□□□□□ -0.51
APTX-227ENST00000485479 NUSAP1Q9BXS6 441 aaKnown RBP11.86□□□□□ -0.51
APTX-227ENST00000485479 LRRC40Q9H9A6 602 aa11.86□□□□□ -0.51
APTX-227ENST00000485479 RPL26L1Q9UNX3 145 aaKnown RBP11.86□□□□□ -0.51
APTX-227ENST00000485479 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.85□□□□□ -0.51
APTX-227ENST00000485479 FPGTO14772 594 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 TMEM63AO94886 807 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 SOD1P00441 154 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 FGF1P05230 155 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 PTGIRP43119 386 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 C21orf59P57076 290 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 DR1Q01658 176 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 MSLNQ13421 630 aaPredicted RBP11.85□□□□□ -0.51
APTX-227ENST00000485479 CSRP2Q16527 193 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 TECPR1Q7Z6L1 1165 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 PNPLA1Q8N8W4 532 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 AP2M1Q96CW1 435 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 LYSMD1Q96S90 227 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 TRIM56Q9BRZ2 755 aaKnown RBP11.85□□□□□ -0.51
APTX-227ENST00000485479 MAGEE1Q9HCI5 957 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 MRPL40Q9NQ50 206 aaKnown RBP11.85□□□□□ -0.51
APTX-227ENST00000485479 SUSD2Q9UGT4 822 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 ASIC3Q9UHC3 531 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 SLC6A14Q9UN76 642 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 DMTF1Q9Y222 760 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 WDFY3Q8IZQ1 3526 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 A6NNZ2 444 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 FADS2P1A8MWK0 482 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 TLR4O00206 839 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 GAS8O95995 478 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 BPIP17213 487 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 CA5AP35218 305 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 FDFT1P37268 417 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 SPINT3P49223 89 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 SESN2P58004 480 aaPredicted RBP11.85□□□□□ -0.51
APTX-227ENST00000485479 HLA-BQ31612 363 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 UAP1L1Q3KQV9 507 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 ZNF648Q5T619 568 aaPredicted RBP11.85□□□□□ -0.51
APTX-227ENST00000485479 DOK6Q6PKX4 331 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 FAM151BQ6UXP7 276 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 PPP1R21Q6ZMI0 780 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 ZNF534Q76KX8 674 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 ABI3BPQ7Z7G0 1075 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 JAMLQ86YT9 394 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 KLHDC8BQ8IXV7 354 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 CBARPQ8N350 705 aaPredicted RBP11.85□□□□□ -0.51
APTX-227ENST00000485479 TTC30BQ8N4P2 665 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 MINDY1Q8N5J2 469 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 CPT1BQ92523 772 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 KLHDC7BQ96G42 594 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 TCEAL2Q9H3H9 227 aaPredicted RBP11.85□□□□□ -0.51
APTX-227ENST00000485479 GAREM1Q9H706 876 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 KLF15Q9UIH9 416 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 CDC23Q9UJX2 597 aa11.85□□□□□ -0.51
APTX-227ENST00000485479 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 MTX2O75431 263 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 EPOP01588 193 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 ZNF30P17039 623 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 PNCKQ6P2M8 343 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 RD3Q7Z3Z2 195 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 TMC3Q7Z5M5 1100 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 HEATR4Q86WZ0 1026 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 RBFAQ8N0V3 343 aa11.84□□□□□ -0.51
APTX-227ENST00000485479 OR4K2Q8NGD2 314 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms