RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	ZNF333	Q96JL9	665 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	ZFYVE19	Q96K21	471 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	RITA1	Q96K30	269 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	BBS4	Q96RK4	519 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	C1QTNF1	Q9BXJ1	281 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	MRPL1	Q9BYD6	325 aa	Known RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	GIMAP4	Q9NUV9	329 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	MRPL15	Q9P015	296 aa	Known RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	FBXO4	Q9UKT5	387 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	INTS6	Q9UL03	887 aa	Known RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	UGGT1	Q9NYU2	1555 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	WRN	Q14191	1432 aa	Predicted RBP eCLIP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	CNTNAP1	P78357	1384 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	CIC	Q96RK0	1608 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	GLI3	P10071	1580 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	TIAM1	Q13009	1591 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	LOC100509620	A0A075B734	347 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	FRMD3	A2A2Y4	597 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	TYW5	A2RUC4	315 aa	Known RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	CXorf65	A6NEN9	183 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024		F8W810	466 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	LDLRAD4	O15165	306 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	SEC14L5	O43304	696 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	DNTT	P04053	509 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	RB1	P06400	928 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	APOA4	P06727	396 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	MYZAP	P0CAP1	466 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	CYP2A6	P11509	494 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	ACTN1	P12814	892 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	IL11	P20809	199 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	EEF1D	P29692	281 aa	Known RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	HOXA7	P31268	230 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	CIITA	P33076	1130 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	PTPN9	P43378	593 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	MRPL12	P52815	198 aa	Known RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	IRX6	P78412	446 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	ZBTB16	Q05516	673 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	ADIPOQ	Q15848	244 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	ME3	Q16798	604 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	FBXO43	Q4G163	708 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	KIAA1755	Q5JYT7	1200 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	MOB3C	Q70IA8	216 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	AFAP1	Q8N556	730 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	TMEM217	Q8N7C4	229 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	IP6K1	Q92551	441 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	RNF183	Q96D59	192 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	SAT2	Q96F10	170 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	PERP	Q96FX8	193 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	CNDP2	Q96KP4	475 aa	Known RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	HARBI1	Q96MB7	349 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	TTC14	Q96N46	770 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	SIN3A	Q96ST3	1273 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	TUBB6	Q9BUF5	446 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	MXD3	Q9BW11	206 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	TM2D2	Q9BX73	214 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	RABEP2	Q9H5N1	569 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	NLK	Q9UBE8	527 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	NOL7	Q9UMY1	257 aa	Known RBP	4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	PCDHGB4	Q9UN71	923 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	PLCH2	O75038	1416 aa		4.03	□□□□□ -1.76
VPS8-223	ENST00000485024	MROH1	Q8NDA8	1641 aa		4.03	□□□□□ -1.77
VPS8-223	ENST00000485024	TULP4	Q9NRJ4	1543 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024		A0A1W2PQ09	198 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	TARSL2	A2RTX5	802 aa	Known RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	HCRTR2	O43614	444 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	LIAS	O43766	372 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	HS6ST1	O60243	411 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	CRYAB	P02511	175 aa	Known RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	HSP90AB1	P08238	724 aa	Known RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	CLTB	P09497	229 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	T-ENOL	P0DO92	83 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	TGFB3	P10600	412 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	ZNF182	P17025	639 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	CD72	P21854	359 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	ACSL1	P33121	698 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	COPB2	P35606	906 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	PIK3CA	P42336	1068 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	DPP6	P42658	865 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	PIP4K2A	P48426	406 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	IFI35	P80217	286 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	ZNF268	Q14587	947 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	DRAP1	Q14919	205 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	RASA2	Q15283	850 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	TMEM266	Q2M3C6	531 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	TCTN1	Q2MV58	587 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	C6orf141	Q5SZD1	244 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	JADE1	Q6IE81	842 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	FAM57B	Q71RH2	274 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	RNF168	Q8IYW5	571 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	POC5	Q8NA72	575 aa		4.02	□□□□□ -1.77
VPS8-223	ENST00000485024	CCDC191	Q8NCU4	936 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms