RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 KCNK5O95279 499 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 SOD1P00441 154 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 FGGP02679 453 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 HTR1BP28222 390 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 TNNT3P45378 269 aaPredicted RBP15.86■□□□□ 0.13
UPF3A-208ENST00000484246 SPINT3P49223 89 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 GDF10P55107 478 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 HNRNPKP61978 463 aaKnown RBP eCLIP15.86■□□□□ 0.13
UPF3A-208ENST00000484246 PRPSAP1Q14558 356 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 PARP6Q2NL67 630 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 SIRPB2Q5JXA9 342 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 ZNF569Q5MCW4 686 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 PRAMEF14Q5SWL7 426 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 KCTD11Q693B1 232 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 ADAMTSL4Q6UY14 1074 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 RANBP10Q6VN20 620 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 LYSMD3Q7Z3D4 306 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 TMC3Q7Z5M5 1100 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 DEFB124Q8NES8 71 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 IPMKQ8NFU5 416 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 FUBP1Q96AE4 644 aaKnown RBP15.86■□□□□ 0.13
UPF3A-208ENST00000484246 TEX101Q9BY14 249 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 ABCG8Q9H221 673 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 ZFYVE1Q9HBF4 777 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 RAD18Q9NS91 495 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 HOMER3Q9NSC5 361 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 TRMT1Q9NXH9 659 aaKnown RBP15.86■□□□□ 0.13
UPF3A-208ENST00000484246 PKD2L2Q9NZM6 624 aa15.86■□□□□ 0.13
UPF3A-208ENST00000484246 FEZ2Q9UHY8 353 aaPredicted RBP15.86■□□□□ 0.13
UPF3A-208ENST00000484246 GOLGA6CA6NDK9 693 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 GOLGA6BA6NDN3 693 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 H3BM21 787 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 K7ESM1 405 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 CACNB4O00305 520 aaPredicted RBP15.85■□□□□ 0.13
UPF3A-208ENST00000484246 PDE2AO00408 941 aaPredicted RBP15.85■□□□□ 0.13
UPF3A-208ENST00000484246 ENC1O14682 589 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 CEP104O60308 925 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 CLDN7O95471 211 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 GOLGA6DP0CG33 693 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 MYCLP1P12525 358 aaPredicted RBP15.85■□□□□ 0.13
UPF3A-208ENST00000484246 KELP23276 732 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 NOVA1P51513 510 aaKnown RBP15.85■□□□□ 0.13
UPF3A-208ENST00000484246 IL9RQ01113 521 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 HENMT1Q5T8I9 393 aaKnown RBP15.85■□□□□ 0.13
UPF3A-208ENST00000484246 ARHGEF18Q6ZSZ5 1173 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 RFLNAQ6ZTI6 216 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 PELI3Q8N2H9 469 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 CCHCR1Q8TD31 782 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 BTN2A2Q8WVV5 523 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 C1orf54Q8WWF1 131 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 EID2BQ96D98 161 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 WDR92Q96MX6 357 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 WDR24Q96S15 920 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 CDC6Q99741 560 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 FSD1LQ9BXM9 530 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 ARNT2Q9HBZ2 717 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 GOLGA6AQ9NYA3 693 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 OR1A2Q9Y585 309 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 SPO11Q9Y5K1 396 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 CSNK1G3Q9Y6M4 447 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 DGKBQ9Y6T7 804 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 LAMA1P25391 3075 aa15.85■□□□□ 0.13
UPF3A-208ENST00000484246 ANKRD36A6QL64 1941 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 DCHS1Q96JQ0 3298 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 A0A0U1RQS6 177 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 ATP1A1P05023 1023 aaKnown RBP15.84■□□□□ 0.13
UPF3A-208ENST00000484246 DGKAP23743 735 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 CXCR5P32302 372 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 HMGCLP35914 325 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 CHRNA4P43681 627 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 BLKP51451 505 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 CDK3Q00526 305 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 FOXK2Q01167 660 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 ALG11Q2TAA5 492 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 PPM1JQ5JR12 505 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 PDPK2PQ6A1A2 396 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 PSAPL1Q6NUJ1 521 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 HEATR4Q86WZ0 1026 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 PHACTR4Q8IZ21 702 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 TTC30BQ8N4P2 665 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 ZNF548Q8NEK5 533 aaPredicted RBP15.84■□□□□ 0.13
UPF3A-208ENST00000484246 DTX3LQ8TDB6 740 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 AP2M1Q96CW1 435 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 NAP1L3Q99457 506 aaPredicted RBP15.84■□□□□ 0.13
UPF3A-208ENST00000484246 C19orf43Q9BQ61 176 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 PHPT1Q9NRX4 125 aaPredicted RBP15.84■□□□□ 0.13
UPF3A-208ENST00000484246 DNAJC28Q9NX36 388 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 KLF15Q9UIH9 416 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 PNMA8BQ9ULN7 279 aaPredicted RBP15.84■□□□□ 0.13
UPF3A-208ENST00000484246 SNX12Q9UMY4 172 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 DRG1Q9Y295 367 aaKnown RBP15.84■□□□□ 0.13
UPF3A-208ENST00000484246 BTBD3Q9Y2F9 522 aa15.84■□□□□ 0.13
UPF3A-208ENST00000484246 ERI2A8K979 691 aaKnown RBP15.83■□□□□ 0.12
UPF3A-208ENST00000484246 DKK1O94907 266 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 RASGRP1O95267 797 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 METTL18O95568 372 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 GIMD1P0DJR0 217 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 JUNDP17535 347 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 BNIP3Q12983 259 aa15.83■□□□□ 0.12
UPF3A-208ENST00000484246 MSLNQ13421 630 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms