RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 VPS51Q9UID3 782 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF180Q9UJW8 692 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 VPS28Q9UK41 221 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SARDHQ9UL12 918 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PLA2G4CQ9UP65 541 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TTLL3Q9Y4R7 772 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 OR51B4Q9Y5P0 310 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 FAM169AQ9Y6X4 670 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 DRGXA6NNA5 263 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 MAFKO60675 156 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 CFIP05156 583 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 VIMP08670 466 aaKnown RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 SRCP12931 536 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 GCAP28676 217 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 OR1E1P30953 314 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 GKP32189 559 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ID4P47928 161 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 IRX4P78413 519 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ECT2LQ008S8 904 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ITKQ08881 620 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ZBTB17Q13105 803 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF177Q13360 481 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 EFTUD2Q15029 972 aaKnown RBP eCLIP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 POLD3Q15054 466 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 CSRP2Q16527 193 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 HNRNPA1L2Q32P51 320 aaKnown RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ACCSLQ4AC99 568 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 TRIM61Q5EBN2 209 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 FAM182AQ5T1J6 154 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 C9orf64Q5T6V5 341 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 GKAP1Q5VSY0 366 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 MARC1Q5VT66 337 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 HHATQ5VTY9 493 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ARMC3Q5W041 872 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 LYSMD4Q5XG99 296 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 AFMIDQ63HM1 303 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 STEAP4Q687X5 459 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF449Q6P9G9 518 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 LPCAT2Q7L5N7 544 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 IGDCC3Q8IVU1 814 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ARHGAP12Q8IWW6 846 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 RGL4Q8IZJ4 473 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 AADATQ8N5Z0 425 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 CHST14Q8NCH0 376 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 OR6K2Q8NGY2 324 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 OR2T3Q8NH03 318 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 GABPB2Q8TAK5 448 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF473Q8WTR7 871 aaKnown RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 DCAKDQ8WVC6 231 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 FATE1Q969F0 183 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 IL12RB2Q99665 862 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 PAIP2Q9BPZ3 127 aaKnown RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 WDR83Q9BRX9 315 aaKnown RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 FEM1AQ9BSK4 669 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 SPON2Q9BUD6 331 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 EDEM2Q9BV94 578 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 FSD1LQ9BXM9 530 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 IQCGQ9H095 443 aaKnown RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 MIR1-1HGQ9H1L0 117 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 GLOD4Q9HC38 313 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 CASS4Q9NQ75 786 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 WSB2Q9NYS7 404 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 KIAA1522Q9P206 1035 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 FCF1Q9Y324 198 aaKnown RBP6.97□□□□□ -1.29
BRCA1-216ENST00000484087 RPS6KL1Q9Y6S9 549 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 FRYQ5TBA9 3013 aa6.97□□□□□ -1.29
BRCA1-216ENST00000484087 ASCC3Q8N3C0 2202 aaKnown RBP6.96□□□□□ -1.3
BRCA1-216ENST00000484087 MED19A0JLT2 244 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-216ENST00000484087 FAM159BA6NKW6 160 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 MEI4A8MW99 385 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 CBX4O00257 560 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 TM9SF1O15321 606 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 RNASEH2AO75792 299 aaKnown RBP6.96□□□□□ -1.3
BRCA1-216ENST00000484087 USP1O94782 785 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 RHOBTB1O94844 696 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ATP5BP06576 529 aaKnown RBP6.96□□□□□ -1.3
BRCA1-216ENST00000484087 CTSLP07711 333 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ACADMP11310 421 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 KRT4P19013 534 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 PAMP19021 973 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 CD6P30203 668 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ETFBP38117 255 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 GRIA1P42261 906 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 CCT5P48643 541 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 SEC24CP53992 1094 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 CDH4P55283 916 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ST8SIA6P61647 398 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 PPP2CBP62714 309 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 PPP2CAP67775 309 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 ARF5P84085 180 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 PPARDQ03181 441 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 IL10RBQ08334 325 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 MGAT5Q09328 741 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 DNAJC3Q13217 504 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 MPP3Q13368 585 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 CRYMQ14894 314 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 LRRC14Q15048 493 aa6.96□□□□□ -1.3
BRCA1-216ENST00000484087 C5orf22Q49AR2 442 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms